RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TMEM74Q96NL1 305 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 RSRP1Q9BUV0 290 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 ADAMTS10Q9H324 1103 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 EPB41L4BQ9H329 900 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 VTI1BQ9UEU0 232 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 LTKP29376 864 aa7.48□□□□□ -1.21
SMC4-218ENST00000486711 ERVFC1P60507 584 aa7.48□□□□□ -1.21
SMC4-218ENST00000486711 SYTL4Q96C24 671 aaPredicted RBP7.48□□□□□ -1.21
SMC4-218ENST00000486711 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
SMC4-218ENST00000486711 DCP1AQ9NPI6 582 aaPredicted RBP7.48□□□□□ -1.21
SMC4-218ENST00000486711 KLHL3Q9UH77 587 aa7.48□□□□□ -1.21
SMC4-218ENST00000486711 CFPP27918 469 aa7.47□□□□□ -1.21
SMC4-218ENST00000486711 SNAP47Q5SQN1 464 aa7.47□□□□□ -1.21
SMC4-218ENST00000486711 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
SMC4-218ENST00000486711 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
SMC4-218ENST00000486711 CCDC74BQ96LY2 380 aa7.47□□□□□ -1.21
SMC4-218ENST00000486711 HTR3BO95264 441 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 TMEM253P0C7T8 217 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 C1QTNF9P0C862 333 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 MPP2Q14168 576 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 LRRC56Q8IYG6 542 aaPredicted RBP7.46□□□□□ -1.22
SMC4-218ENST00000486711 LILRA2Q8N149 483 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 OXR1Q8N573 874 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
SMC4-218ENST00000486711 POLR3KQ9Y2Y1 108 aaPredicted RBP7.46□□□□□ -1.22
SMC4-218ENST00000486711 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
SMC4-218ENST00000486711 ZGLP1P0C6A0 271 aa7.45□□□□□ -1.22
SMC4-218ENST00000486711 CHMP4BP1P59074 171 aa7.45□□□□□ -1.22
SMC4-218ENST00000486711 PHACTR4Q8IZ21 702 aa7.45□□□□□ -1.22
SMC4-218ENST00000486711 BAHD1Q8TBE0 780 aaPredicted RBP7.45□□□□□ -1.22
SMC4-218ENST00000486711 KIAA1522Q9P206 1035 aaPredicted RBP7.45□□□□□ -1.22
SMC4-218ENST00000486711 PCDHA11Q9Y5I1 949 aa7.45□□□□□ -1.22
SMC4-218ENST00000486711 FITM1A5D6W6 292 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 GRIN3BO60391 1043 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 LRRN2O75325 713 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 KRT1P04264 644 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 VAMP1P23763 118 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 FAM160A1Q05DH4 1040 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 MLECQ14165 292 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 REC114Q7Z4M0 266 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 C1QL4Q86Z23 238 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 GOLM1Q8NBJ4 401 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 SLC26A8Q96RN1 970 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 RNF32Q9H0A6 362 aa7.44□□□□□ -1.22
SMC4-218ENST00000486711 MINDY4BA8MYZ0 360 aa7.43□□□□□ -1.22
SMC4-218ENST00000486711 TRHRP34981 398 aaPredicted RBP7.43□□□□□ -1.22
SMC4-218ENST00000486711 NR0B2Q15466 257 aa7.43□□□□□ -1.22
SMC4-218ENST00000486711 CLEC16AQ2KHT3 1053 aa7.43□□□□□ -1.22
SMC4-218ENST00000486711 SLC6A17Q9H1V8 727 aa7.43□□□□□ -1.22
SMC4-218ENST00000486711 SP110Q9HB58 689 aa7.43□□□□□ -1.22
SMC4-218ENST00000486711 TCAF2A6NFQ2 919 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 MED14OSP0DP75 135 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 GLDCP23378 1020 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 GBP1P32455 592 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 CHRNEQ04844 493 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 DUSP4Q13115 394 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 FAM196AQ6ZSG2 479 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 IRF2BP1Q8IU81 584 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 SPPL2CQ8IUH8 684 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 SIAH1Q8IUQ4 282 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 KIF2CQ99661 725 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
SMC4-218ENST00000486711 CWC22Q9HCG8 908 aaKnown RBP7.42□□□□□ -1.22
SMC4-218ENST00000486711 CD320Q9NPF0 282 aa7.42□□□□□ -1.22
SMC4-218ENST00000486711 NPIPB6E9PJ23 425 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 GARTP22102 1010 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 CWF19L2Q2TBE0 894 aaKnown RBP7.41□□□□□ -1.22
SMC4-218ENST00000486711 ATG14Q6ZNE5 492 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 ANKS4BQ8N8V4 417 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 C19orf44Q9H6X5 657 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 KBTBD4Q9NVX7 518 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
SMC4-218ENST00000486711 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 RGS13O14921 159 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 DNAJA2O60884 412 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 ZSCAN22P10073 491 aaPredicted RBP7.4□□□□□ -1.22
SMC4-218ENST00000486711 RNF4P78317 190 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 TEKQ02763 1124 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 KCNA10Q16322 511 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 LCNL1Q6ZST4 164 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 ENOX1Q8TC92 643 aaKnown RBP7.4□□□□□ -1.22
SMC4-218ENST00000486711 LRRC3Q9BY71 257 aa7.4□□□□□ -1.22
SMC4-218ENST00000486711 ETV2O00321 342 aaPredicted RBP7.39□□□□□ -1.23
SMC4-218ENST00000486711 TLR3O15455 904 aaKnown RBP7.39□□□□□ -1.23
SMC4-218ENST00000486711 KCNN1Q92952 543 aa7.39□□□□□ -1.23
SMC4-218ENST00000486711 KCNQ5Q9NR82 932 aa7.39□□□□□ -1.23
SMC4-218ENST00000486711 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
SMC4-218ENST00000486711 RAG1P15918 1043 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 TCF3P15923 654 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 NMIQ13287 307 aaPredicted RBP7.38□□□□□ -1.23
SMC4-218ENST00000486711 SNX17Q15036 470 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 TIGD5Q53EQ6 642 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 ARSHQ5FYA8 562 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms