RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 SH2B2O14492 632 aaPredicted RBP15.19■□□□□ 0.02
PKD1-219ENST00000486339 EIF3JO75822 258 aaKnown RBP15.19■□□□□ 0.02
PKD1-219ENST00000486339 LIFRP42702 1097 aa15.19■□□□□ 0.02
PKD1-219ENST00000486339 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
PKD1-219ENST00000486339 HERC4Q5GLZ8 1057 aaPredicted RBP15.19■□□□□ 0.02
PKD1-219ENST00000486339 MCTP2Q6DN12 878 aa15.19■□□□□ 0.02
PKD1-219ENST00000486339 LINC00116Q8NCU8 138 aa15.19■□□□□ 0.02
PKD1-219ENST00000486339 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
PKD1-219ENST00000486339 STK24Q9Y6E0 443 aa15.19■□□□□ 0.02
PKD1-219ENST00000486339 IQSEC2Q5JU85 1478 aa15.19■□□□□ 0.02
PKD1-219ENST00000486339 ASPRV1Q53RT3 343 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 ATG9AQ7Z3C6 839 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 SPICE1Q8N0Z3 855 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 EHBP1Q8NDI1 1231 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 RBSNQ9H1K0 784 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 NOP56O00567 594 aaKnown RBP15.18■□□□□ 0.02
PKD1-219ENST00000486339 PDIA6Q15084 440 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 NEK11Q8NG66 645 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 FLOT1O75955 427 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 ARID5AQ03989 594 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 TMEM63CQ9P1W3 806 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 CTNND2Q9UQB3 1225 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 GDF11O95390 407 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 TMED8Q6PL24 325 aaPredicted RBP15.18■□□□□ 0.02
PKD1-219ENST00000486339 LUC7L2Q9Y383 392 aaKnown RBP15.18■□□□□ 0.02
PKD1-219ENST00000486339 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
PKD1-219ENST00000486339 IFNAR1P17181 557 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 ZNF445P59923 1031 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 CENPHQ9H3R5 247 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 NEBLO76041 1014 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 PFKFB1P16118 471 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
PKD1-219ENST00000486339 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 PAGR1Q9BTK6 254 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 AMNQ9BXJ7 453 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 SMTNP53814 917 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 CSGALNACT2Q8N6G5 542 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
PKD1-219ENST00000486339 GAS7O60861 476 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 DCAF17Q5H9S7 520 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 ZKSCAN5Q9Y2L8 839 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 ARHGEF28Q8N1W1 1705 aaKnown RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 SCARF1Q14162 830 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 NT5C3AQ9H0P0 336 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 SERTAD1Q9UHV2 236 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 GCOM1H8Y6P7 765 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 POLR2MP0CAP2 368 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 TBC1D8BQ0IIM8 1120 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 PAK1Q13153 545 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 IFI16Q16666 785 aaKnown RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 BRDTQ58F21 947 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 NFE2L3Q9Y4A8 694 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 CETN3O15182 167 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 PRR16Q569H4 304 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 NLRX1Q86UT6 975 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 CHAMP1Q96JM3 812 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
PKD1-219ENST00000486339 FRMD4BQ9Y2L6 1034 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
PKD1-219ENST00000486339 LARGE1O95461 756 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 OR52Z1P0C646 297 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 CDK8P49336 464 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 NLRP12P59046 1061 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 TMCO3Q6UWJ1 677 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 CBX8Q9HC52 389 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 PNMA2Q9UL42 364 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
PKD1-219ENST00000486339 MEGF6O75095 1541 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 CSF1RP07333 972 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 NEFHP12036 1026 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 FAM193AP78312 1265 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 SUPT20HL1Q3ZLR7 823 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
PKD1-219ENST00000486339 SH3RF3Q8TEJ3 882 aaPredicted RBP15.15■□□□□ 0.02
PKD1-219ENST00000486339 NOC4LQ9BVI4 516 aaKnown RBP15.15■□□□□ 0.02
PKD1-219ENST00000486339 VPS16Q9H269 839 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 SYNRGQ9UMZ2 1314 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 CCDC175P0C221 793 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 CMA1P23946 247 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 NT5C2P49902 561 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 PTGDRQ13258 359 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 PCDHA7Q9UN72 937 aa15.15■□□□□ 0.02
PKD1-219ENST00000486339 EPB41P11171 864 aaKnown RBP15.14■□□□□ 0.01
PKD1-219ENST00000486339 NOLC1Q14978 699 aaKnown RBP eCLIP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms