RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 CCDC84Q86UT8 332 aaPredicted RBP14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 TDHQ8IZJ6 230 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 C12orf42Q96LP6 360 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 P2RX7Q99572 595 aaKnown RBP14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 SWAP70Q9UH65 585 aa14.32□□□□□ -0.12
HLA-DOA-204ENST00000485901 MYH7P12883 1935 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 HIP1O00291 1037 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 DLL1O00548 723 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 MSCO60682 206 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 CYP2D6P10635 497 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 SDSP20132 328 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 ERVK-24P63145 666 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 CCNA1P78396 465 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 MTMR2Q13614 643 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 MORN1Q5T089 497 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 CCAR1Q8IX12 1150 aaKnown RBP14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 CABP5Q9NP86 173 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 RBPJLQ9UBG7 517 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 STXBP5LQ9Y2K9 1186 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 MYH1P12882 1939 aa14.31□□□□□ -0.12
HLA-DOA-204ENST00000485901 SOX1O00570 391 aaPredicted RBP14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 GDF11O95390 407 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 ZKSCAN1P17029 563 aaPredicted RBP14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 SHMT1P34896 483 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 TDO2P48775 406 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP14P54578 494 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 TTC22Q5TAA0 569 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 PLEKHH3Q7Z736 793 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 IFNL3Q8IZI9 196 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 APBA2Q99767 749 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 DNAH12Q6ZR08 3092 aa14.3□□□□□ -0.12
HLA-DOA-204ENST00000485901 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 GH2P01242 217 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 CYP2B6P20813 491 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 JAG1P78504 1218 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 FAM109BQ6ICB4 259 aaPredicted RBP14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 GPR142Q7Z601 462 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 CCDC17Q96LX7 622 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L15C9J2P7 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L13C9JLJ4 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L11C9JVI0 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L18D6R9N7 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L22D6RA61 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L17D6RBQ6 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L19D6RCP7 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L20D6RJB6 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 PFASO15067 1338 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 HOXC6P09630 235 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 CDK8P49336 464 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 EVX2Q03828 476 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 CACNB2Q08289 660 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 USP17L24Q0WX57 530 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 MAP2K5Q13163 448 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 ERICH6BQ5W0A0 696 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 LHX8Q68G74 356 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 NAPBQ9H115 298 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
HLA-DOA-204ENST00000485901 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 SLC15A5A6NIM6 579 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 TRIM32Q13049 653 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 Q3C1V9 767 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 MFSD14CQ5VZR4 134 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 SLC44A5Q8NCS7 719 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 UBE2OQ9C0C9 1292 aaKnown RBP14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 EPB41L4AQ9HCS5 686 aaPredicted RBP14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
HLA-DOA-204ENST00000485901 STRNO43815 780 aa14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 ALX1Q15699 326 aa14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 CWC27Q6UX04 472 aaKnown RBP14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms