RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ANKRD23Q86SG2 305 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 PROCA1Q8NCQ7 364 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 SH2D4AQ9H788 454 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 SENP2Q9HC62 589 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 RNF186Q9NXI6 227 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 AGTPBP1Q9UPW5 1226 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 TNKSO95271 1327 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 F5H6K3 240 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 PDHXO00330 501 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 RAD21O60216 631 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 CPA1P15085 419 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 MCCP23508 829 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 MAP2K1Q02750 393 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 KLRC3Q07444 240 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 KRT32Q14532 448 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 SEC23AQ15436 765 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 RASGRP2Q7LDG7 609 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 WBP1LQ9NX94 342 aa18.22■□□□□ 0.51
RPUSD3-217ENST00000485705 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 PRC1O43663 620 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 TRPA1O75762 1119 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 NDUFB10O96000 172 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 TOP1P11387 765 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 TTC14Q96N46 770 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 NUP88Q99567 741 aaPredicted RBP18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 GOPCQ9HD26 462 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 MTMR7Q9Y216 660 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 RLFQ13129 1914 aa18.21■□□□□ 0.51
RPUSD3-217ENST00000485705 CYP2C8P10632 490 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 MCM5P33992 734 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 OTUD7BQ6GQQ9 843 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
RPUSD3-217ENST00000485705 TBC1D8O95759 1140 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 HOXA7P31268 230 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 SLFN13Q68D06 897 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 GMCL1P1Q8NEA9 526 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 LPAR1Q92633 364 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 BACH2Q9BYV9 841 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 SYNPO2Q9UMS6 1093 aa18.19■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L15C9J2P7 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L13C9JLJ4 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L11C9JVI0 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L18D6R9N7 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L22D6RA61 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L17D6RBQ6 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L19D6RCP7 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L20D6RJB6 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 WDR46O15213 610 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 USP17L24Q0WX57 530 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 CRHR2Q13324 411 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 CATSPERGQ6ZRH7 1159 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 LY9Q9HBG7 655 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 ZCCHC17Q9NP64 241 aaKnown RBP18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
RPUSD3-217ENST00000485705 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 ERICH2A1L162 156 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 CA12O43570 354 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 ALDH1A1P00352 501 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 WTAPQ15007 396 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 BLOC1S2Q6QNY1 142 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 P2RX7Q99572 595 aaKnown RBP18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 KAT14Q9H8E8 782 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 ZSWIM6Q9HCJ5 1215 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 FBXO28Q9NVF7 368 aa18.17■□□□□ 0.5
RPUSD3-217ENST00000485705 HMGB1P09429 215 aaKnown RBP18.16■□□□□ 0.5
RPUSD3-217ENST00000485705 OSBPP22059 807 aa18.16■□□□□ 0.5
RPUSD3-217ENST00000485705 RPS6KB1P23443 525 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms