RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
CLRN1-206ENST00000485607 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
CLRN1-206ENST00000485607 FAM84BQ96KN1 310 aaPredicted RBP9.33□□□□□ -0.92
CLRN1-206ENST00000485607 R3HDMLQ9H3Y0 253 aa9.33□□□□□ -0.92
CLRN1-206ENST00000485607 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
CLRN1-206ENST00000485607 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
CLRN1-206ENST00000485607 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
CLRN1-206ENST00000485607 RIPOR2Q9Y4F9 1068 aa9.33□□□□□ -0.92
CLRN1-206ENST00000485607 COL1A1P02452 1464 aaPredicted RBP9.33□□□□□ -0.92
CLRN1-206ENST00000485607 TNRC18O15417 2968 aaPredicted RBP9.33□□□□□ -0.92
CLRN1-206ENST00000485607 FAM205AQ6ZU69 1335 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 HIBADHP31937 336 aaKnown RBP9.32□□□□□ -0.92
CLRN1-206ENST00000485607 SCTRP47872 440 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 RGS19P49795 217 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
CLRN1-206ENST00000485607 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 MFSD14BQ5SR56 506 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 NBPF12Q5TAG4 269 aaPredicted RBP9.32□□□□□ -0.92
CLRN1-206ENST00000485607 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
CLRN1-206ENST00000485607 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 RAB6BQ9NRW1 208 aa9.32□□□□□ -0.92
CLRN1-206ENST00000485607 HTTP42858 3142 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 E9PSI1 815 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 TM4SF4P48230 202 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 RBM5P52756 815 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLRN1-206ENST00000485607 SOX10P56693 466 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 MLLT1Q03111 559 aaPredicted RBP9.31□□□□□ -0.92
CLRN1-206ENST00000485607 SLFN5Q08AF3 891 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 RASA3Q14644 834 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 ARMC9Q7Z3E5 817 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 CTU1Q7Z7A3 348 aaKnown RBP9.31□□□□□ -0.92
CLRN1-206ENST00000485607 VGLL2Q8N8G2 317 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 ZNF296Q8WUU4 475 aaPredicted RBP9.31□□□□□ -0.92
CLRN1-206ENST00000485607 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 TTF2Q9UNY4 1162 aaKnown RBP9.31□□□□□ -0.92
CLRN1-206ENST00000485607 PTPRCP08575 1304 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 MROH5Q6ZUA9 1318 aa9.31□□□□□ -0.92
CLRN1-206ENST00000485607 AMPD1P23109 780 aa9.3□□□□□ -0.92
CLRN1-206ENST00000485607 CHAF1AQ13111 956 aaPredicted RBP9.3□□□□□ -0.92
CLRN1-206ENST00000485607 MAP3K11Q16584 847 aa9.3□□□□□ -0.92
CLRN1-206ENST00000485607 METTL24Q5JXM2 366 aa9.3□□□□□ -0.92
CLRN1-206ENST00000485607 FBXO33Q7Z6M2 555 aa9.3□□□□□ -0.92
CLRN1-206ENST00000485607 TDRD3Q9H7E2 651 aaKnown RBP9.3□□□□□ -0.92
CLRN1-206ENST00000485607 ZNF70Q9UC06 446 aaPredicted RBP9.3□□□□□ -0.92
CLRN1-206ENST00000485607 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
CLRN1-206ENST00000485607 ARAP2Q8WZ64 1704 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 KRBA1A5PL33 1030 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 SHISA8B8ZZ34 492 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 IGF2BP3O00425 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLRN1-206ENST00000485607 MYO1BO43795 1136 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 USP2O75604 605 aaPredicted RBP9.29□□□□□ -0.92
CLRN1-206ENST00000485607 CRKP46108 304 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 RFX5P48382 616 aaPredicted RBP9.29□□□□□ -0.92
CLRN1-206ENST00000485607 CACNB3P54284 484 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
CLRN1-206ENST00000485607 SREBF2Q12772 1141 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 EDARADDQ8WWZ3 215 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 WNK4Q96J92 1243 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 TEPSINQ96N21 525 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 SMC4Q9NTJ3 1288 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
CLRN1-206ENST00000485607 ECM29Q5VYK3 1845 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 TCP10L2B9ZVM9 353 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 PPP1R12BO60237 982 aaPredicted RBP9.28□□□□□ -0.92
CLRN1-206ENST00000485607 PDE8BO95263 885 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 FURINP09958 794 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 GRIN2CQ14957 1233 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 SUPT20HL1Q3ZLR7 823 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 DZIP1LQ8IYY4 767 aaKnown RBP9.28□□□□□ -0.92
CLRN1-206ENST00000485607 TRMT2AQ8IZ69 625 aaKnown RBP9.28□□□□□ -0.92
CLRN1-206ENST00000485607 ZSCAN10Q96SZ4 725 aaPredicted RBP9.28□□□□□ -0.92
CLRN1-206ENST00000485607 TMEM39BQ9GZU3 492 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 OSBPL3Q9H4L5 887 aa9.28□□□□□ -0.92
CLRN1-206ENST00000485607 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
CLRN1-206ENST00000485607 ZBTB48P10074 688 aaPredicted RBP9.27□□□□□ -0.93
CLRN1-206ENST00000485607 FGFR2P21802 821 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 CENPCQ03188 943 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 ALDH1L2Q3SY69 923 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 TMEM214Q6NUQ4 689 aaKnown RBP9.27□□□□□ -0.93
CLRN1-206ENST00000485607 ATG9AQ7Z3C6 839 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 ELP3Q9H9T3 547 aa9.27□□□□□ -0.93
CLRN1-206ENST00000485607 OTOFQ9HC10 1997 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 MANSC4A6NHS7 340 aaPredicted RBP9.26□□□□□ -0.93
CLRN1-206ENST00000485607 EYA2O00167 538 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 FKTNO75072 461 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 BMP4P12644 408 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
CLRN1-206ENST00000485607 NR1H3Q13133 447 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 PUM3Q15397 648 aaKnown RBP9.26□□□□□ -0.93
CLRN1-206ENST00000485607 CAVIN4Q5BKX8 364 aa9.26□□□□□ -0.93
CLRN1-206ENST00000485607 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
CLRN1-206ENST00000485607 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms