RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 RAD21O60216 631 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 POTEEQ6S8J3 1075 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 PROCA1Q8NCQ7 364 aaPredicted RBP16.74■□□□□ 0.27
PKDCC-207ENST00000485578 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
PKDCC-207ENST00000485578 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
PKDCC-207ENST00000485578 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
PKDCC-207ENST00000485578 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 NMT2O60551 498 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 FGAP02671 866 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 EEF2P13639 858 aaKnown RBP16.73■□□□□ 0.27
PKDCC-207ENST00000485578 VCAM1P19320 739 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 FCGRTP55899 365 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
PKDCC-207ENST00000485578 USP17L2Q6R6M4 530 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 TBC1D10CQ8IV04 446 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
PKDCC-207ENST00000485578 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
PKDCC-207ENST00000485578 P2RX7Q99572 595 aaKnown RBP16.73■□□□□ 0.27
PKDCC-207ENST00000485578 GJB1P08034 283 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 BCRP11274 1271 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 GJA8P48165 433 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
PKDCC-207ENST00000485578 MTFR1Q15390 333 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 LRRC47Q8N1G4 583 aaKnown RBP16.72■□□□□ 0.27
PKDCC-207ENST00000485578 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 RPAP3Q9H6T3 665 aaPredicted RBP16.72■□□□□ 0.27
PKDCC-207ENST00000485578 TXNRD2Q9NNW7 524 aa16.72■□□□□ 0.27
PKDCC-207ENST00000485578 CCL5P13501 91 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 OSBPP22059 807 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 CHMLP26374 656 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 SLAIN1Q8ND83 568 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
PKDCC-207ENST00000485578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
PKDCC-207ENST00000485578 NEDD4P46934 1319 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 DLL1O00548 723 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 FARP2O94887 1054 aaPredicted RBP16.7■□□□□ 0.26
PKDCC-207ENST00000485578 CAPN2P17655 700 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 TFAP4Q01664 338 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 PTH1RQ03431 593 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 GABRQQ9UN88 632 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
PKDCC-207ENST00000485578 C19orf81C9J6K1 198 aa16.69■□□□□ 0.26
PKDCC-207ENST00000485578 EVI5O60447 810 aa16.69■□□□□ 0.26
PKDCC-207ENST00000485578 HERVK_113P62684 666 aa16.69■□□□□ 0.26
PKDCC-207ENST00000485578 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
PKDCC-207ENST00000485578 IGKV6D-41A0A0C4DH26 115 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 A0A1W2PPC1 479 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
PKDCC-207ENST00000485578 CNMDO75829 334 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 ALX1Q15699 326 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
PKDCC-207ENST00000485578 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
PKDCC-207ENST00000485578 C12orf42Q96LP6 360 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 PNMA3Q9UL41 463 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
PKDCC-207ENST00000485578 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 Q3C1V9 767 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 SMCHD1A6NHR9 2005 aa16.67■□□□□ 0.26
PKDCC-207ENST00000485578 ZNFX1Q9P2E3 1918 aaKnown RBP16.66■□□□□ 0.26
PKDCC-207ENST00000485578 SPDYE16A6NNV3 312 aaPredicted RBP16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 HIP1O00291 1037 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 TFRCP02786 760 aaKnown RBP16.66■□□□□ 0.26
PKDCC-207ENST00000485578 PRKCZQ05513 592 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 PDE4BQ07343 736 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.26
PKDCC-207ENST00000485578 CATSPERGQ6ZRH7 1159 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 ATG4CQ96DT6 458 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 PORCNQ9H237 461 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 IL17RBQ9NRM6 502 aa16.66■□□□□ 0.26
PKDCC-207ENST00000485578 BTBD7Q9P203 1132 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms