RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L11C9JVI0 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L18D6R9N7 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L22D6RA61 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L19D6RCP7 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L20D6RJB6 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 FARP2O94887 1054 aaPredicted RBP21.29■■□□□ 1
RNF38-207ENST00000484621 SLC3A2P08195 630 aaKnown RBP21.29■■□□□ 1
RNF38-207ENST00000484621 VCAM1P19320 739 aa21.29■■□□□ 1
RNF38-207ENST00000484621 HERVK_113P62684 666 aa21.29■■□□□ 1
RNF38-207ENST00000484621 ATP2B2Q01814 1243 aa21.29■■□□□ 1
RNF38-207ENST00000484621 USP17L24Q0WX57 530 aa21.29■■□□□ 1
RNF38-207ENST00000484621 NMIQ13287 307 aaPredicted RBP21.29■■□□□ 1
RNF38-207ENST00000484621 SH2D4AQ9H788 454 aa21.29■■□□□ 1
RNF38-207ENST00000484621 TNPO2O14787 897 aaKnown RBP21.28■■□□□ 1
RNF38-207ENST00000484621 SDSP20132 328 aa21.28■■□□□ 1
RNF38-207ENST00000484621 RASA1P20936 1047 aa21.28■■□□□ 1
RNF38-207ENST00000484621 PDE4AP27815 886 aa21.28■■□□□ 1
RNF38-207ENST00000484621 RAET1EQ8TD07 263 aa21.28■■□□□ 1
RNF38-207ENST00000484621 U2AF1L4Q8WU68 220 aaKnown RBP21.28■■□□□ 1
RNF38-207ENST00000484621 RPAP3Q9H6T3 665 aaPredicted RBP21.28■■□□□ 1
RNF38-207ENST00000484621 KANSL2Q9H9L4 492 aa21.28■■□□□ 1
RNF38-207ENST00000484621 GREB1LQ9C091 1923 aaPredicted RBP21.27■■□□□ 1
RNF38-207ENST00000484621 MYH4Q9Y623 1939 aa21.27■■□□□ 1
RNF38-207ENST00000484621 PRDM1O75626 825 aa21.27■■□□□ 1
RNF38-207ENST00000484621 PDE4BQ07343 736 aa21.27■■□□□ 1
RNF38-207ENST00000484621 PPARAQ07869 468 aa21.27■■□□□ 1
RNF38-207ENST00000484621 VPS53Q5VIR6 699 aa21.27■■□□□ 1
RNF38-207ENST00000484621 Q7L0L9 218 aa21.27■■□□□ 1
RNF38-207ENST00000484621 ZNF444Q8N0Y2 327 aaPredicted RBP21.27■■□□□ 1
RNF38-207ENST00000484621 GTF3C2Q8WUA4 911 aaPredicted RBP21.27■■□□□ 1
RNF38-207ENST00000484621 HTATIP2Q9BUP3 242 aa21.27■■□□□ 1
RNF38-207ENST00000484621 EEF2P13639 858 aaKnown RBP21.26■□□□□ 0.99
RNF38-207ENST00000484621 CATSPERGQ6ZRH7 1159 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 SIAH1Q8IUQ4 282 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 COA7Q96BR5 231 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 PAGR1Q9BTK6 254 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 MORF4L1Q9UBU8 362 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 TMX2Q9Y320 296 aa21.26■□□□□ 0.99
RNF38-207ENST00000484621 FOXP2O15409 715 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
RNF38-207ENST00000484621 ZNF589Q86UQ0 364 aaPredicted RBP21.25■□□□□ 0.99
RNF38-207ENST00000484621 GPRC5AQ8NFJ5 357 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 NKX2-3Q8TAU0 364 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 TANGO6Q9C0B7 1094 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 CCDC171Q6TFL3 1326 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 A0A0C4DFX4 3053 aa21.25■□□□□ 0.99
RNF38-207ENST00000484621 HIP1O00291 1037 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 RAD21O60216 631 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 PEX10O60683 326 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 ELNP15502 786 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 SPICE1Q8N0Z3 855 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 DIS3LQ8TF46 1054 aaKnown RBP21.24■□□□□ 0.99
RNF38-207ENST00000484621 LPAR1Q92633 364 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
RNF38-207ENST00000484621 VCPKMTQ9H867 229 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 TXNRD2Q9NNW7 524 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 BIN2Q9UBW5 565 aaPredicted RBP21.24■□□□□ 0.99
RNF38-207ENST00000484621 NR2E3Q9Y5X4 410 aa21.24■□□□□ 0.99
RNF38-207ENST00000484621 CTDSPL2Q05D32 466 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 ALX1Q15699 326 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 KIAA1755Q5JYT7 1200 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 TTC22Q5TAA0 569 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
RNF38-207ENST00000484621 CCAR1Q8IX12 1150 aaKnown RBP21.23■□□□□ 0.99
RNF38-207ENST00000484621 GOPCQ9HD26 462 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 RBPJLQ9UBG7 517 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 CUL9Q8IWT3 2517 aa21.23■□□□□ 0.99
RNF38-207ENST00000484621 TSPY3P0CV98 308 aa21.22■□□□□ 0.99
RNF38-207ENST00000484621 TSPY8P0CW00 308 aa21.22■□□□□ 0.99
RNF38-207ENST00000484621 HSPD1P10809 573 aaKnown RBP21.22■□□□□ 0.99
RNF38-207ENST00000484621 FLT3LGP49771 235 aa21.22■□□□□ 0.99
RNF38-207ENST00000484621 ERVK-9P63128 1117 aa21.22■□□□□ 0.99
RNF38-207ENST00000484621 ERVK-24P63145 666 aa21.22■□□□□ 0.99
RNF38-207ENST00000484621 SGPL1O95470 568 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 FGAP02671 866 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 FAM47AQ5JRC9 791 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 RABGAP1Q9Y3P9 1069 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 RLFQ13129 1914 aa21.21■□□□□ 0.99
RNF38-207ENST00000484621 PARP14Q460N5 1801 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 SPDYE16A6NNV3 312 aaPredicted RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 WDR46O15213 610 aaKnown RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 EVI5O60447 810 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 FLOT1O75955 427 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 MNX1P50219 401 aaPredicted RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 TFAP4Q01664 338 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 COG2Q14746 738 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 Q3C1V9 767 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 CWC22Q9HCG8 908 aaKnown RBP21.2■□□□□ 0.98
RNF38-207ENST00000484621 HOXC10Q9NYD6 342 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 ANAPC4Q9UJX5 808 aa21.2■□□□□ 0.98
RNF38-207ENST00000484621 A0A1W2PPC1 479 aa21.19■□□□□ 0.98
RNF38-207ENST00000484621 ADCY3O60266 1144 aa21.19■□□□□ 0.98
RNF38-207ENST00000484621 INHAP05111 366 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms