RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ETV3P41162 512 aa10.41□□□□□ -0.74
UBR3-210ENST00000484596 TMEM201Q5SNT2 666 aa10.41□□□□□ -0.74
UBR3-210ENST00000484596 FAM13CQ8NE31 585 aa10.41□□□□□ -0.74
UBR3-210ENST00000484596 PPP1R13LQ8WUF5 828 aa10.41□□□□□ -0.74
UBR3-210ENST00000484596 STRIP2Q9ULQ0 834 aa10.41□□□□□ -0.74
UBR3-210ENST00000484596 DNAJA1P31689 397 aaKnown RBP10.4□□□□□ -0.74
UBR3-210ENST00000484596 SOX9P48436 509 aa10.4□□□□□ -0.74
UBR3-210ENST00000484596 MLECQ14165 292 aa10.4□□□□□ -0.74
UBR3-210ENST00000484596 BRMS1Q9HCU9 246 aa10.4□□□□□ -0.74
UBR3-210ENST00000484596 EFR3BQ9Y2G0 817 aa10.4□□□□□ -0.74
UBR3-210ENST00000484596 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
UBR3-210ENST00000484596 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 GRIN3BO60391 1043 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 IMPDH2P12268 514 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 YARSP54577 528 aaKnown RBP10.39□□□□□ -0.75
UBR3-210ENST00000484596 CYB5D2Q8WUJ1 264 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 TMEM40Q8WWA1 233 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
UBR3-210ENST00000484596 Q96M66 194 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 REV1Q9UBZ9 1251 aa10.39□□□□□ -0.75
UBR3-210ENST00000484596 ATE1O95260 518 aa10.38□□□□□ -0.75
UBR3-210ENST00000484596 PIWIL2Q8TC59 973 aaKnown RBP10.38□□□□□ -0.75
UBR3-210ENST00000484596 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
UBR3-210ENST00000484596 NASPP49321 788 aaPredicted RBP10.37□□□□□ -0.75
UBR3-210ENST00000484596 ZSWIM9Q86XI8 627 aa10.37□□□□□ -0.75
UBR3-210ENST00000484596 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.75
UBR3-210ENST00000484596 TANGO6Q9C0B7 1094 aa10.37□□□□□ -0.75
UBR3-210ENST00000484596 WASH4PA8MWX3 477 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 CHURC1-FNTBB4DL54 471 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 HTR3BO95264 441 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 C8AP07357 584 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 GK5Q6ZS86 529 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 DRC1Q96MC2 740 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 FERD3LQ96RJ6 166 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 C19orf73Q9NVV2 129 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 PCDHB14Q9Y5E9 798 aa10.36□□□□□ -0.75
UBR3-210ENST00000484596 SSBP05455 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
UBR3-210ENST00000484596 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
UBR3-210ENST00000484596 AFMP43652 599 aa10.35□□□□□ -0.75
UBR3-210ENST00000484596 LRRFIP1Q32MZ4 808 aaKnown RBP10.35□□□□□ -0.75
UBR3-210ENST00000484596 ZNF648Q5T619 568 aaPredicted RBP10.35□□□□□ -0.75
UBR3-210ENST00000484596 CPLX3Q8WVH0 158 aa10.35□□□□□ -0.75
UBR3-210ENST00000484596 DUSP15Q9H1R2 295 aaPredicted RBP10.35□□□□□ -0.75
UBR3-210ENST00000484596 KLHL3Q9UH77 587 aa10.35□□□□□ -0.75
UBR3-210ENST00000484596 ESR1P03372 595 aa10.34□□□□□ -0.75
UBR3-210ENST00000484596 GDNFP39905 211 aa10.34□□□□□ -0.75
UBR3-210ENST00000484596 KCNMB1Q16558 191 aa10.34□□□□□ -0.75
UBR3-210ENST00000484596 CRBNQ96SW2 442 aa10.34□□□□□ -0.75
UBR3-210ENST00000484596 SRRTQ9BXP5 876 aaKnown RBP10.34□□□□□ -0.75
UBR3-210ENST00000484596 ZNF503-AS2A6NEH8 195 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 DNAJA2O60884 412 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 FGRP09769 529 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 CLCQ05315 142 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 TMPRSS7Q7RTY8 843 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 BAHD1Q8TBE0 780 aaPredicted RBP10.33□□□□□ -0.76
UBR3-210ENST00000484596 ARMC5Q96C12 935 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 ZNRF3Q9ULT6 936 aa10.33□□□□□ -0.76
UBR3-210ENST00000484596 LRRN2O75325 713 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 MCF2L2Q86YR7 1114 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 DTWD2Q8NBA8 298 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 ALPK1Q96QP1 1244 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.76
UBR3-210ENST00000484596 SLAMF8Q9P0V8 285 aa10.32□□□□□ -0.76
UBR3-210ENST00000484596 SRFP11831 508 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 TPP2P29144 1249 aaPredicted RBP10.31□□□□□ -0.76
UBR3-210ENST00000484596 CREG2Q8IUH2 290 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 RBBP8NLQ8NC74 664 aaPredicted RBP10.31□□□□□ -0.76
UBR3-210ENST00000484596 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 KIRREL1Q96J84 757 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 CCDC74BQ96LY2 380 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 TRIT1Q9H3H1 467 aaKnown RBP10.31□□□□□ -0.76
UBR3-210ENST00000484596 KCNH3Q9ULD8 1083 aa10.31□□□□□ -0.76
UBR3-210ENST00000484596 DNAJC25-GNG10A0A024R161 153 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 FARP2O94887 1054 aaPredicted RBP10.3□□□□□ -0.76
UBR3-210ENST00000484596 EIF6P56537 245 aaKnown RBP10.3□□□□□ -0.76
UBR3-210ENST00000484596 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 FBXW10Q5XX13 1052 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 KIF2CQ99661 725 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 KRTAP9-9Q9BYP9 154 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 KRTAP9-4Q9BYQ2 154 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 GPR62Q9BZJ7 368 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 GPATCH2Q9NW75 528 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 GMIPQ9P107 970 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 PPT2Q9UMR5 302 aa10.3□□□□□ -0.76
UBR3-210ENST00000484596 LRRC10BA6NIK2 292 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
UBR3-210ENST00000484596 RALGPS1Q5JS13 557 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 PHACTR4Q8IZ21 702 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 LIN37Q96GY3 246 aaPredicted RBP10.29□□□□□ -0.76
UBR3-210ENST00000484596 CCDC120Q96HB5 630 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 KREMEN1Q96MU8 473 aa10.29□□□□□ -0.76
UBR3-210ENST00000484596 MEIS3P2A8K0S8 358 aa10.28□□□□□ -0.76
UBR3-210ENST00000484596 UBXN4Q92575 508 aa10.28□□□□□ -0.76
UBR3-210ENST00000484596 SLC22A31A6NKX4 558 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 BTBD11A6QL63 1104 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms