RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
CCDC66-219ENST00000484441 LRRN4CLQ8ND94 238 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 UBE2FQ969M7 185 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
CCDC66-219ENST00000484441 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
CCDC66-219ENST00000484441 LRRN2O75325 713 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 ESR1P03372 595 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
CCDC66-219ENST00000484441 GBP1P32455 592 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 RAD51AP2Q09MP3 1159 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
CCDC66-219ENST00000484441 TAB3Q8N5C8 712 aaPredicted RBP8.34□□□□□ -1.07
CCDC66-219ENST00000484441 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
CCDC66-219ENST00000484441 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
CCDC66-219ENST00000484441 PRDM7Q9NQW5 492 aa8.34□□□□□ -1.07
CCDC66-219ENST00000484441 RNF4P78317 190 aa8.33□□□□□ -1.08
CCDC66-219ENST00000484441 INTS3Q68E01 1043 aaKnown RBP8.33□□□□□ -1.08
CCDC66-219ENST00000484441 TSPYL5Q86VY4 417 aaPredicted RBP8.33□□□□□ -1.08
CCDC66-219ENST00000484441 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
CCDC66-219ENST00000484441 ZSWIM5Q9P217 1185 aa8.33□□□□□ -1.08
CCDC66-219ENST00000484441 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
CCDC66-219ENST00000484441 SOX9P48436 509 aa8.32□□□□□ -1.08
CCDC66-219ENST00000484441 NBPF12Q5TAG4 269 aaPredicted RBP8.32□□□□□ -1.08
CCDC66-219ENST00000484441 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
CCDC66-219ENST00000484441 GPATCH2Q9NW75 528 aa8.32□□□□□ -1.08
CCDC66-219ENST00000484441 ACRP10323 421 aa8.31□□□□□ -1.08
CCDC66-219ENST00000484441 TPP2P29144 1249 aaPredicted RBP8.31□□□□□ -1.08
CCDC66-219ENST00000484441 C9orf131Q5VYM1 1079 aa8.31□□□□□ -1.08
CCDC66-219ENST00000484441 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
CCDC66-219ENST00000484441 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
CCDC66-219ENST00000484441 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
CCDC66-219ENST00000484441 SHISA3A0PJX4 238 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 WASH4PA8MWX3 477 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 BIN1O00499 593 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 TM9SF2Q99805 663 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 GINM1Q9NU53 330 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
CCDC66-219ENST00000484441 PAX4O43316 350 aa8.29□□□□□ -1.08
CCDC66-219ENST00000484441 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
CCDC66-219ENST00000484441 ENOX1Q8TC92 643 aaKnown RBP8.29□□□□□ -1.08
CCDC66-219ENST00000484441 ALPK1Q96QP1 1244 aa8.29□□□□□ -1.08
CCDC66-219ENST00000484441 FERD3LQ96RJ6 166 aa8.29□□□□□ -1.08
CCDC66-219ENST00000484441 CLEC3AO75596 197 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 LSRQ86X29 649 aaPredicted RBP8.28□□□□□ -1.08
CCDC66-219ENST00000484441 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 HDAC8Q9BY41 377 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 DUSP13Q9UII6 198 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
CCDC66-219ENST00000484441 GDNFP39905 211 aa8.27□□□□□ -1.09
CCDC66-219ENST00000484441 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
CCDC66-219ENST00000484441 ASIC4Q96FT7 647 aa8.27□□□□□ -1.09
CCDC66-219ENST00000484441 CCDC120Q96HB5 630 aa8.27□□□□□ -1.09
CCDC66-219ENST00000484441 TCF3P15923 654 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 CHMP4BP1P59074 171 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
CCDC66-219ENST00000484441 CREG2Q8IUH2 290 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 ACBD3Q9H3P7 528 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 SUCOQ9UBS9 1254 aaKnown RBP8.26□□□□□ -1.09
CCDC66-219ENST00000484441 EFR3BQ9Y2G0 817 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 ZNF281Q9Y2X9 895 aa8.26□□□□□ -1.09
CCDC66-219ENST00000484441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
CCDC66-219ENST00000484441 GUCY2CP25092 1073 aa8.25□□□□□ -1.09
CCDC66-219ENST00000484441 SNW1Q13573 536 aaKnown RBP8.25□□□□□ -1.09
CCDC66-219ENST00000484441 DAGLBQ8NCG7 672 aa8.25□□□□□ -1.09
CCDC66-219ENST00000484441 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
CCDC66-219ENST00000484441 TMEM59LQ9UK28 342 aa8.25□□□□□ -1.09
CCDC66-219ENST00000484441 PCDHA11Q9Y5I1 949 aa8.25□□□□□ -1.09
CCDC66-219ENST00000484441 DNAJC25-GNG10A0A024R161 153 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 GIPRP48546 466 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 PMS1P54277 932 aaKnown RBP8.24□□□□□ -1.09
CCDC66-219ENST00000484441 EGR3Q06889 387 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 TMC3Q7Z5M5 1100 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 C19orf47Q8N9M1 422 aaKnown RBP8.24□□□□□ -1.09
CCDC66-219ENST00000484441 SEC16BQ96JE7 1060 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 ZNF512BQ96KM6 892 aaPredicted RBP8.24□□□□□ -1.09
CCDC66-219ENST00000484441 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 SLAMF8Q9P0V8 285 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
CCDC66-219ENST00000484441 SIGLEC6O43699 453 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 TEKQ02763 1124 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 CCDC81Q6ZN84 652 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 ZNF655Q8N720 491 aaPredicted RBP8.23□□□□□ -1.09
CCDC66-219ENST00000484441 FAM168AQ92567 244 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
CCDC66-219ENST00000484441 ASCC2Q9H1I8 757 aaPredicted RBP8.23□□□□□ -1.09
CCDC66-219ENST00000484441 CCSER2Q9H7U1 834 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 IGSF5Q9NSI5 407 aa8.23□□□□□ -1.09
CCDC66-219ENST00000484441 SHOXO15266 292 aa8.22□□□□□ -1.09
CCDC66-219ENST00000484441 LTKP29376 864 aa8.22□□□□□ -1.09
CCDC66-219ENST00000484441 AFMP43652 599 aa8.22□□□□□ -1.09
CCDC66-219ENST00000484441 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
CCDC66-219ENST00000484441 CLEC16AQ2KHT3 1053 aa8.22□□□□□ -1.09
CCDC66-219ENST00000484441 UNC5AQ6ZN44 842 aa8.22□□□□□ -1.09
CCDC66-219ENST00000484441 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms