RNA–Protein interactions for RNA: ENST00000484313.3

ZEB2-222, Transcript of zinc finger E-box binding homeobox 2, human

TSL 1 (best)

Gene ZEB2, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-222	ENST00000484313	RGS3	P49796	1198 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	RHBDL3	P58872	404 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	TCP10	Q12799	353 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	MMRN1	Q13201	1228 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	MTX1	Q13505	466 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	RASGRF1	Q13972	1273 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	SCYL3	Q8IZE3	742 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	PARK7	Q99497	189 aa	Known RBP	10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	DDX4	Q9NQI0	724 aa	Known RBP	10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	DENND2A	Q9ULE3	1009 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	AFG3L2	Q9Y4W6	797 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	MYPN	Q86TC9	1320 aa		10.33	□□□□□ -0.76
ZEB2-222	ENST00000484313	PIK3CD	O00329	1044 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	SLURP2	P0DP57	97 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	CYP2C8	P10632	490 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	PTPRA	P18433	802 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	GRK4	P32298	578 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	IL15	P40933	162 aa	Predicted RBP	10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	PRKCZ	Q05513	592 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	KIF22	Q14807	665 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	SLC4A8	Q2Y0W8	1093 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	CCDC102B	Q68D86	513 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	SPNS2	Q8IVW8	549 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	USP40	Q9NVE5	1235 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	PA2G4	Q9UQ80	394 aa	Known RBP	10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	LRRFIP2	Q9Y608	721 aa	Known RBP	10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	MROH7-TTC4	A0A0A0MT08	1334 aa		10.32	□□□□□ -0.76
ZEB2-222	ENST00000484313	DDTL	A6NHG4	134 aa	Predicted RBP	10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	CT47B1	P0C2W7	299 aa	Predicted RBP	10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	UBTFL1	P0CB47	393 aa	Predicted RBP	10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	CCL5	P13501	91 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	CTH	P32929	405 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	ELOA	Q14241	798 aa	Known RBP	10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	MEIS3	Q99687	375 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	SIL1	Q9H173	461 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	SMC4	Q9NTJ3	1288 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	EVA1B	Q9NVM1	165 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	GABRQ	Q9UN88	632 aa		10.31	□□□□□ -0.76
ZEB2-222	ENST00000484313	GPR75-ASB3	A0A0A6YYF3	556 aa		10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	MYC	P01106	439 aa	Predicted RBP	10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	MSS51	Q4VC12	460 aa		10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	PAK6	Q9NQU5	681 aa	Predicted RBP	10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	CEP126	Q9P2H0	1117 aa		10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	GPSM3	Q9Y4H4	160 aa		10.3	□□□□□ -0.76
ZEB2-222	ENST00000484313	COL6A3	P12111	3177 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	BTD	P43251	543 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	FCGRT	P55899	365 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	ZGPAT	Q8N5A5	531 aa	Known RBP	10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	NKX2-3	Q8TAU0	364 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	RAET1E	Q8TD07	263 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	UNC93B1	Q9H1C4	597 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	GNL3L	Q9NVN8	582 aa	Known RBP	10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	MTMR7	Q9Y216	660 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313	ZHX2	Q9Y6X8	837 aa		10.29	□□□□□ -0.76
ZEB2-222	ENST00000484313		A0A1B0GUL7	405 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	ZBTB7B	O15156	539 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	CTNND1	O60716	968 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	SKI	P12755	728 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	HOXD10	P28358	340 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	ARID4A	P29374	1257 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	FLT3LG	P49771	235 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	MCCD1	P59942	119 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	MECOM	Q03112	1051 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	PTK2	Q05397	1052 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	KCNH2	Q12809	1159 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	RRP1B	Q14684	758 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	TREML2	Q5T2D2	321 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	PDXDC2P	Q6P474	469 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	FASTKD5	Q7L8L6	764 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	CCDC84	Q86UT8	332 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	PLEKHM2	Q8IWE5	1019 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	FAM160A2	Q8N612	972 aa	Predicted RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	ARMC2	Q8NEN0	867 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	U2AF1L4	Q8WU68	220 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	WNT2B	Q93097	391 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	XAGE2	Q96GT9	111 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	API5	Q9BZZ5	524 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	NOB1	Q9ULX3	412 aa	Known RBP	10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313	AGTPBP1	Q9UPW5	1226 aa		10.28	□□□□□ -0.76
ZEB2-222	ENST00000484313		A0A0G2JMZ2	1700 aa		10.27	□□□□□ -0.76
ZEB2-222	ENST00000484313	MYH1	P12882	1939 aa		10.27	□□□□□ -0.76
ZEB2-222	ENST00000484313	DXO	O77932	396 aa	Known RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	FARP2	O94887	1054 aa	Predicted RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	SGPL1	O95470	568 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	MAP4K4	O95819	1239 aa	Predicted RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	INHA	P05111	366 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	CCNYL3	P0C7X3	344 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	ELN	P15502	786 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	ZEB1	P37275	1124 aa	Predicted RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	TIMM10	P62072	90 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	FAM110C	Q1W6H9	321 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	USP17L2	Q6R6M4	530 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	PI16	Q6UXB8	463 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	DZIP1	Q86YF9	867 aa	Known RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	ARHGAP45	Q92619	1136 aa		10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.27	□□□□□ -0.77	7e-6	■□□□□ 8.1
ZEB2-222	ENST00000484313	NSUN4	Q96CB9	384 aa	Known RBP	10.27	□□□□□ -0.77
ZEB2-222	ENST00000484313	RNF208	Q9H0X6	261 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms