RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 ANKRD45Q5TZF3 282 aa20.06■□□□□ 0.8
PCGF3-211ENST00000484141 DEFB123Q8N688 67 aa20.06■□□□□ 0.8
PCGF3-211ENST00000484141 GDF15Q99988 308 aa20.06■□□□□ 0.8
PCGF3-211ENST00000484141 EPB41L4AQ9HCS5 686 aaPredicted RBP20.06■□□□□ 0.8
PCGF3-211ENST00000484141 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
PCGF3-211ENST00000484141 CYP2B6P20813 491 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 BMP8BP34820 402 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 GPR153Q6NV75 609 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 C16orf86Q6ZW13 317 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 APPBP2Q92624 585 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.82e-6■■■■□ 23
PCGF3-211ENST00000484141 SWAP70Q9UH65 585 aa20.05■□□□□ 0.8
PCGF3-211ENST00000484141 ZMYND8Q9ULU4 1186 aaPredicted RBP20.05■□□□□ 0.8
PCGF3-211ENST00000484141 TTC41PQ6P2S7 1318 aa20.04■□□□□ 0.8
PCGF3-211ENST00000484141 GPAA1O43292 621 aa20.04■□□□□ 0.8
PCGF3-211ENST00000484141 USP14P54578 494 aa20.04■□□□□ 0.8
PCGF3-211ENST00000484141 TMEM179Q6ZVK1 233 aa20.04■□□□□ 0.8
PCGF3-211ENST00000484141 SPICE1Q8N0Z3 855 aa20.04■□□□□ 0.8
PCGF3-211ENST00000484141 SPDYE16A6NNV3 312 aaPredicted RBP20.03■□□□□ 0.8
PCGF3-211ENST00000484141 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
PCGF3-211ENST00000484141 MX1P20591 662 aa20.03■□□□□ 0.8
PCGF3-211ENST00000484141 Q7L0L9 218 aa20.03■□□□□ 0.8
PCGF3-211ENST00000484141 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
PCGF3-211ENST00000484141 TRIB2Q92519 343 aa20.03■□□□□ 0.8
PCGF3-211ENST00000484141 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCGF3-211ENST00000484141 ICA1Q05084 483 aa20.02■□□□□ 0.8
PCGF3-211ENST00000484141 CCL14Q16627 93 aa20.02■□□□□ 0.8
PCGF3-211ENST00000484141 CCDC129Q6ZRS4 1044 aa20.02■□□□□ 0.8
PCGF3-211ENST00000484141 GPR142Q7Z601 462 aa20.02■□□□□ 0.8
PCGF3-211ENST00000484141 ANKLE1Q8NAG6 615 aa20.02■□□□□ 0.8
PCGF3-211ENST00000484141 GLRX3O76003 335 aaKnown RBP20.01■□□□□ 0.79
PCGF3-211ENST00000484141 EEF2P13639 858 aaKnown RBP20.01■□□□□ 0.79
PCGF3-211ENST00000484141 ATP2B2Q01814 1243 aa20.01■□□□□ 0.79
PCGF3-211ENST00000484141 HDAC1Q13547 482 aaPredicted RBP20.01■□□□□ 0.79
PCGF3-211ENST00000484141 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
PCGF3-211ENST00000484141 STXBP5LQ9Y2K9 1186 aa20.01■□□□□ 0.79
PCGF3-211ENST00000484141 RABGAP1Q9Y3P9 1069 aa20.01■□□□□ 0.79
PCGF3-211ENST00000484141 GREB1LQ9C091 1923 aaPredicted RBP20.01■□□□□ 0.79
PCGF3-211ENST00000484141 PARP14Q460N5 1801 aa20.01■□□□□ 0.79
PCGF3-211ENST00000484141 IGHDP01880 384 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 HMGCRP04035 888 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 SYN1P17600 705 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 RASA1P20936 1047 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 SBK1Q52WX2 424 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 MORN1Q5T089 497 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 SAMD1Q6SPF0 538 aaPredicted RBP20■□□□□ 0.79
PCGF3-211ENST00000484141 USP6NLQ92738 828 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 DDRGK1Q96HY6 314 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 TANGO6Q9C0B7 1094 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 NBPF3Q9H094 633 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 ARPP21Q9UBL0 812 aaPredicted RBP20■□□□□ 0.79
PCGF3-211ENST00000484141 TMX2Q9Y320 296 aa20■□□□□ 0.79
PCGF3-211ENST00000484141 ERC2O15083 957 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 FOXP2O15409 715 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 PRDM1O75626 825 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
PCGF3-211ENST00000484141 MAGEA10P43363 369 aaPredicted RBP19.99■□□□□ 0.79
PCGF3-211ENST00000484141 LRIT3Q3SXY7 679 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 ZMYM1Q5SVZ6 1142 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 WDR78Q5VTH9 848 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 PLEKHH3Q7Z736 793 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 AMOTL1Q8IY63 956 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 TDHQ8IZJ6 230 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 CCDC17Q96LX7 622 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 NUDT12Q9BQG2 462 aa19.99■□□□□ 0.79
PCGF3-211ENST00000484141 HMX1Q9NP08 348 aaPredicted RBP19.99■□□□□ 0.79
PCGF3-211ENST00000484141 COL11A1P12107 1806 aaPredicted RBP19.98■□□□□ 0.79
PCGF3-211ENST00000484141 APPP05067 770 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 MAPK4P31152 587 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 PDE1AP54750 535 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 LBX2Q6XYB7 198 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 IFNL3Q8IZI9 196 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 LNPKQ9C0E8 428 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 C11orf49Q9H6J7 331 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 VCPKMTQ9H867 229 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 ARHGEF10LQ9HCE6 1279 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 FBXO28Q9NVF7 368 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 MTMR10Q9NXD2 777 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 A0A0G2JMZ2 1700 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 RPTORQ8N122 1335 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 ALPK3Q96L96 1907 aa19.98■□□□□ 0.79
PCGF3-211ENST00000484141 PATL2C9JE40 543 aaKnown RBP19.97■□□□□ 0.79
PCGF3-211ENST00000484141 TDO2P48775 406 aa19.97■□□□□ 0.79
PCGF3-211ENST00000484141 COG2Q14746 738 aa19.97■□□□□ 0.79
PCGF3-211ENST00000484141 CCAR1Q8IX12 1150 aaKnown RBP19.97■□□□□ 0.79
PCGF3-211ENST00000484141 GTF3C2Q8WUA4 911 aaPredicted RBP19.97■□□□□ 0.79
PCGF3-211ENST00000484141 ATG4CQ96DT6 458 aa19.97■□□□□ 0.79
PCGF3-211ENST00000484141 INCENPQ9NQS7 918 aa19.97■□□□□ 0.79
PCGF3-211ENST00000484141 FLRT1Q9NZU1 646 aa19.97■□□□□ 0.79
PCGF3-211ENST00000484141 CUL9Q8IWT3 2517 aa19.96■□□□□ 0.79
PCGF3-211ENST00000484141 GIMAP6Q6P9H5 292 aa19.96■□□□□ 0.79
PCGF3-211ENST00000484141 NUP88Q99567 741 aaPredicted RBP19.96■□□□□ 0.79
PCGF3-211ENST00000484141 MOV10L1Q9BXT6 1211 aaKnown RBP19.96■□□□□ 0.79
PCGF3-211ENST00000484141 UBE2OQ9C0C9 1292 aaKnown RBP19.96■□□□□ 0.79
PCGF3-211ENST00000484141 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.79
PCGF3-211ENST00000484141 RAD21O60216 631 aa19.95■□□□□ 0.78
PCGF3-211ENST00000484141 FLOT1O75955 427 aa19.95■□□□□ 0.78
PCGF3-211ENST00000484141 PRKAR2AP13861 404 aaKnown RBP19.95■□□□□ 0.78
PCGF3-211ENST00000484141 PTPREP23469 700 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms