RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 STRIP1Q5VSL9 837 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 OTUD7BQ6GQQ9 843 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 ZNF713Q8N859 430 aaPredicted RBP11.08□□□□□ -0.64
UFD1-208ENST00000484101 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.64
UFD1-208ENST00000484101 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 PHF20Q9BVI0 1012 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 ANO10Q9NW15 660 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 USP25Q9UHP3 1055 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 JAG2Q9Y219 1238 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 CLIC4Q9Y696 253 aa11.08□□□□□ -0.64
UFD1-208ENST00000484101 CYP2D6P10635 497 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 SCG2P13521 617 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 RASA1P20936 1047 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 KCNA3P22001 575 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 NOVP48745 357 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 VEGFBP49765 207 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 PTPAQ15257 358 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 PFKFB3Q16875 520 aaPredicted RBP11.07□□□□□ -0.64
UFD1-208ENST00000484101 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 RNF214Q8ND24 703 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 CCDC12Q8WUD4 166 aaPredicted RBP11.07□□□□□ -0.64
UFD1-208ENST00000484101 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
UFD1-208ENST00000484101 PYM1Q9BRP8 204 aaKnown RBP11.07□□□□□ -0.64
UFD1-208ENST00000484101 EHD4Q9H223 541 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 VPS33BQ9H267 617 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 FAM13BQ9NYF5 915 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 MRVI1Q9Y6F6 885 aa11.07□□□□□ -0.64
UFD1-208ENST00000484101 TRIM75PA6NK02 468 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 GOLGA6L6A8MZA4 724 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 ESPNB1AK53 854 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 TOP1P11387 765 aaKnown RBP11.06□□□□□ -0.64
UFD1-208ENST00000484101 CDK8P49336 464 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 PKN1Q16512 942 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 AXDND1Q5T1B0 1012 aaPredicted RBP11.06□□□□□ -0.64
UFD1-208ENST00000484101 SOGA3Q5TF21 947 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 RESP18Q5W5W9 173 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 ZSCAN30Q86W11 494 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 CEP57L1Q8IYX8 460 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 FERMT2Q96AC1 680 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 ZDHHC15Q96MV8 337 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 GPR101Q96P66 508 aaPredicted RBP11.06□□□□□ -0.64
UFD1-208ENST00000484101 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
UFD1-208ENST00000484101 DHX36Q9H2U1 1008 aaKnown RBP11.06□□□□□ -0.64
UFD1-208ENST00000484101 GOLPH3LQ9H4A5 285 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
UFD1-208ENST00000484101 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
UFD1-208ENST00000484101 GLTPD2A6NH11 291 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 POTECB2RU33 542 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 BTBD18B2RXH4 712 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 PFKFB1P16118 471 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
UFD1-208ENST00000484101 SYKP43405 635 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 GRIK5Q16478 980 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 CAMK4Q16566 473 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 KANK3Q6NY19 840 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
UFD1-208ENST00000484101 PIAS4Q8N2W9 510 aaPredicted RBP11.05□□□□□ -0.64
UFD1-208ENST00000484101 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 BPIFA3Q9BQP9 254 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 SERPINA10Q9UK55 444 aa11.05□□□□□ -0.64
UFD1-208ENST00000484101 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
UFD1-208ENST00000484101 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 MYO1BO43795 1136 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 ZNF202O95125 648 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 PTPREP23469 700 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 ZNF165P49910 485 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 MMP14P50281 582 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 PLCD1P51178 756 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 NDUFA8P51970 172 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 TPM4P67936 248 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 GABPAQ06546 454 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 KIAA2012Q0VF49 1180 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 ORC2Q13416 577 aaPredicted RBP11.04□□□□□ -0.64
UFD1-208ENST00000484101 DHX8Q14562 1220 aaKnown RBP11.04□□□□□ -0.64
UFD1-208ENST00000484101 ANO6Q4KMQ2 910 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 RTKN2Q8IZC4 609 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
UFD1-208ENST00000484101 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
UFD1-208ENST00000484101 IL17RBQ9NRM6 502 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
UFD1-208ENST00000484101 SRPRBQ9Y5M8 271 aaKnown RBP11.04□□□□□ -0.64
UFD1-208ENST00000484101 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms