RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 KAT14Q9H8E8 782 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 SMC3Q9UQE7 1217 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
SMAD9-204ENST00000483941 KIAA0100Q14667 2235 aaKnown RBP16.31■□□□□ 0.2
SMAD9-204ENST00000483941 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
SMAD9-204ENST00000483941 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 CPLX1O14810 134 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 DDAH1O94760 285 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 SHMT1P34896 483 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMAD9-204ENST00000483941 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
SMAD9-204ENST00000483941 SEC23AQ15436 765 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 TMEM179Q6ZVK1 233 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 ENAHQ8N8S7 591 aaPredicted RBP16.31■□□□□ 0.2
SMAD9-204ENST00000483941 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
SMAD9-204ENST00000483941 POTEFA5A3E0 1075 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
SMAD9-204ENST00000483941 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 PDCP20941 246 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 KIF5BP33176 963 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 MAP3K10Q02779 954 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
SMAD9-204ENST00000483941 TRIM17Q9Y577 477 aa16.3■□□□□ 0.2
SMAD9-204ENST00000483941 SMIM22K7EJ46 135 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 TTLL1O95922 423 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
SMAD9-204ENST00000483941 GNAQP50148 359 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 STK3Q13188 491 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
SMAD9-204ENST00000483941 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
SMAD9-204ENST00000483941 GOLGA8AA7E2F4 631 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 NOVP48745 357 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 NUCB2P80303 420 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 EVX2Q03828 476 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 PRKG1Q13976 671 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
SMAD9-204ENST00000483941 RTN1Q16799 776 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 SPRYD7Q5W111 196 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
SMAD9-204ENST00000483941 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 CHMP5Q9NZZ3 219 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
SMAD9-204ENST00000483941 NID2Q14112 1375 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 AKR1B1P15121 316 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 SCRN1Q12765 414 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 MICU3Q86XE3 530 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 ZNF341Q9BYN7 854 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
SMAD9-204ENST00000483941 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
SMAD9-204ENST00000483941 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 MANSC4A6NHS7 340 aaPredicted RBP16.26■□□□□ 0.19
SMAD9-204ENST00000483941 LARGE1O95461 756 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 ASNSP08243 561 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMAD9-204ENST00000483941 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
SMAD9-204ENST00000483941 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 FAM184AQ8NB25 1140 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 PNMA1Q8ND90 353 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 WASF1Q92558 559 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
SMAD9-204ENST00000483941 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
SMAD9-204ENST00000483941 CTNND1O60716 968 aaKnown RBP16.25■□□□□ 0.19
SMAD9-204ENST00000483941 TROAPQ12815 778 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 IFNL1Q8IU54 200 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 TRIM22Q8IYM9 498 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 MKL1Q969V6 931 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 OTOFQ9HC10 1997 aa16.25■□□□□ 0.19
SMAD9-204ENST00000483941 NMT2O60551 498 aa16.24■□□□□ 0.19
SMAD9-204ENST00000483941 INHBEP58166 350 aa16.24■□□□□ 0.19
SMAD9-204ENST00000483941 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
SMAD9-204ENST00000483941 ICA1Q05084 483 aa16.24■□□□□ 0.19
SMAD9-204ENST00000483941 MIGA2Q7L4E1 593 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms