RNA–Protein interactions for RNA: ENST00000483938.1

LPP-215, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-215ENST00000483938 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
LPP-215ENST00000483938 KLHL3Q9UH77 587 aa6.57□□□□□ -1.36
LPP-215ENST00000483938 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
LPP-215ENST00000483938 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 ZGLP1P0C6A0 271 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 TNNI2P48788 182 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 FAM196AQ6ZSG2 479 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 C1QL4Q86Z23 238 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 PDZD8Q8NEN9 1154 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 DIRC2Q96SL1 478 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 EPB41L4BQ9H329 900 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
LPP-215ENST00000483938 MINDY4BA8MYZ0 360 aa6.55□□□□□ -1.36
LPP-215ENST00000483938 VWCEQ96DN2 955 aa6.55□□□□□ -1.36
LPP-215ENST00000483938 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
LPP-215ENST00000483938 KRTAP4-7Q9BYR0 210 aa6.55□□□□□ -1.36
LPP-215ENST00000483938 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
LPP-215ENST00000483938 SHISA3A0PJX4 238 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 LTKP29376 864 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 NR0B2Q15466 257 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 PHACTR4Q8IZ21 702 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 LILRA2Q8N149 483 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 RNF32Q9H0A6 362 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 ROBO2Q9HCK4 1378 aa6.54□□□□□ -1.36
LPP-215ENST00000483938 NFIBO00712 420 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 RGS13O14921 159 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 C1QTNF9P0C862 333 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 CFPP27918 469 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 TRHRP34981 398 aaPredicted RBP6.53□□□□□ -1.36
LPP-215ENST00000483938 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
LPP-215ENST00000483938 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 FBXL19Q6PCT2 694 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 DHX38Q92620 1227 aaKnown RBP6.53□□□□□ -1.36
LPP-215ENST00000483938 KIF2CQ99661 725 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 DCP1AQ9NPI6 582 aaPredicted RBP6.53□□□□□ -1.36
LPP-215ENST00000483938 COPRSQ9NQ92 184 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 ZNF281Q9Y2X9 895 aa6.53□□□□□ -1.36
LPP-215ENST00000483938 FITM1A5D6W6 292 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
LPP-215ENST00000483938 GREM1O60565 184 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 ATE1O95260 518 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 TEKQ02763 1124 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 MLECQ14165 292 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 ANKLE2Q86XL3 938 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 LRRC56Q8IYG6 542 aaPredicted RBP6.52□□□□□ -1.37
LPP-215ENST00000483938 OXR1Q8N573 874 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 CD320Q9NPF0 282 aa6.52□□□□□ -1.37
LPP-215ENST00000483938 SUPT16HQ9Y5B9 1047 aaKnown RBP6.52□□□□□ -1.37
LPP-215ENST00000483938 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 UBOX5O94941 541 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 RNF4P78317 190 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 TIGD5Q53EQ6 642 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 IRF2BP1Q8IU81 584 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 ZSCAN18Q8TBC5 510 aaPredicted RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 ENOX1Q8TC92 643 aaKnown RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 GZF1Q9H116 711 aaPredicted RBP6.51□□□□□ -1.37
LPP-215ENST00000483938 C19orf44Q9H6X5 657 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 GMIPQ9P107 970 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 PCDHB14Q9Y5E9 798 aa6.51□□□□□ -1.37
LPP-215ENST00000483938 GLDCP23378 1020 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 GBP1P32455 592 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 CHRNEQ04844 493 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 DUSP4Q13115 394 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
LPP-215ENST00000483938 CLEC16AQ2KHT3 1053 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 SLC26A8Q96RN1 970 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 HDAC8Q9BY41 377 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 SLC6A17Q9H1V8 727 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 KCNK12Q9HB15 430 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 CWC22Q9HCG8 908 aaKnown RBP6.5□□□□□ -1.37
LPP-215ENST00000483938 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 EBF1Q9UH73 591 aa6.5□□□□□ -1.37
LPP-215ENST00000483938 TMEM253P0C7T8 217 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 RAG1P15918 1043 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 CRKP46108 304 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 CDCP2Q5VXM1 449 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 OVOS1Q6IE37 1185 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 ZNF296Q8WUU4 475 aaPredicted RBP6.49□□□□□ -1.37
LPP-215ENST00000483938 LINC01599Q8WXQ3 324 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
LPP-215ENST00000483938 G6PC3Q9BUM1 346 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.49□□□□□ -1.37
LPP-215ENST00000483938 EHMT1Q9H9B1 1298 aa6.49□□□□□ -1.37
LPP-215ENST00000483938 YBX2Q9Y2T7 364 aaKnown RBP6.49□□□□□ -1.37
LPP-215ENST00000483938 ETV2O00321 342 aaPredicted RBP6.48□□□□□ -1.37
LPP-215ENST00000483938 SNX17Q15036 470 aa6.48□□□□□ -1.37
LPP-215ENST00000483938 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
LPP-215ENST00000483938 RNF111Q6ZNA4 994 aa6.48□□□□□ -1.37
LPP-215ENST00000483938 ATG14Q6ZNE5 492 aa6.48□□□□□ -1.37
LPP-215ENST00000483938 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
LPP-215ENST00000483938 SPPL2CQ8IUH8 684 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms