RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 USP17L15C9J2P7 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L13C9JLJ4 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L11C9JVI0 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L18D6R9N7 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L22D6RA61 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L17D6RBQ6 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L19D6RCP7 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L20D6RJB6 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 ZNF213O14771 459 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 RANBP6O60518 1105 aaKnown RBP31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 CTGFP29279 349 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 USP17L24Q0WX57 530 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 RRP12Q5JTH9 1297 aaKnown RBP31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 NKX2-3Q8TAU0 364 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 MTMR4Q9NYA4 1195 aa31.41■■■□□ 2.62
GTF3C4-202ENST00000483873 HERVK_113P62684 666 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 AKNAD1Q5T1N1 836 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 CATSPERGQ6ZRH7 1159 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 STAG1Q8WVM7 1258 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 ABHD8Q96I13 439 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 CLIP2Q9UDT6 1046 aa31.4■■■□□ 2.62
GTF3C4-202ENST00000483873 NEDD4P46934 1319 aa31.39■■■□□ 2.62
GTF3C4-202ENST00000483873 PEX10O60683 326 aa31.39■■■□□ 2.62
GTF3C4-202ENST00000483873 EFCC1Q9HA90 598 aa31.39■■■□□ 2.62
GTF3C4-202ENST00000483873 NMT2O60551 498 aa31.38■■■□□ 2.61
GTF3C4-202ENST00000483873 GCLCP48506 637 aaPredicted RBP31.38■■■□□ 2.61
GTF3C4-202ENST00000483873 LPAR1Q92633 364 aa31.38■■■□□ 2.61
GTF3C4-202ENST00000483873 IL17RBQ9NRM6 502 aa31.38■■■□□ 2.61
GTF3C4-202ENST00000483873 IMMTQ16891 758 aaKnown RBP31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 POTEEQ6S8J3 1075 aa31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 MFSD6Q6ZSS7 791 aa31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 ESYT1Q9BSJ8 1104 aa31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 CTNNA3Q9UI47 895 aa31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 HTTP42858 3142 aa31.37■■■□□ 2.61
GTF3C4-202ENST00000483873 RAD21O60216 631 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 TTLL1O95922 423 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 KIF22Q14807 665 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 FAM110CQ1W6H9 321 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 LRRC47Q8N1G4 583 aaKnown RBP31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 TANGO6Q9C0B7 1094 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 GOPCQ9HD26 462 aa31.36■■■□□ 2.61
GTF3C4-202ENST00000483873 PSMC4P43686 418 aa31.35■■■□□ 2.61
GTF3C4-202ENST00000483873 TRIM47Q96LD4 638 aa31.35■■■□□ 2.61
GTF3C4-202ENST00000483873 TXNRD2Q9NNW7 524 aa31.35■■■□□ 2.61
GTF3C4-202ENST00000483873 A0A0G2JMZ2 1700 aa31.35■■■□□ 2.61
GTF3C4-202ENST00000483873 MKL1Q969V6 931 aa31.34■■■□□ 2.61
GTF3C4-202ENST00000483873 RNF41Q9H4P4 317 aaPredicted RBP31.34■■■□□ 2.61
GTF3C4-202ENST00000483873 DOCK3Q8IZD9 2030 aa31.34■■■□□ 2.61
GTF3C4-202ENST00000483873 WDR46O15213 610 aaKnown RBP31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 PCP11498 1178 aaKnown RBP31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 PAGR1Q9BTK6 254 aa31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 RBPJLQ9UBG7 517 aa31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 MORF4L1Q9UBU8 362 aa31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 COL11A1P12107 1806 aaPredicted RBP31.33■■■□□ 2.61
GTF3C4-202ENST00000483873 SPDYE16A6NNV3 312 aaPredicted RBP31.32■■■□□ 2.61
GTF3C4-202ENST00000483873 F5H6K3 240 aa31.32■■■□□ 2.61
GTF3C4-202ENST00000483873 KLRC3Q07444 240 aa31.32■■■□□ 2.61
GTF3C4-202ENST00000483873 NUP88Q99567 741 aaPredicted RBP31.32■■■□□ 2.61
GTF3C4-202ENST00000483873 STX8Q9UNK0 236 aa31.32■■■□□ 2.61
GTF3C4-202ENST00000483873 CDC45O75419 566 aa31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 NDUFB10O96000 172 aa31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 PKN2Q16513 984 aaKnown RBP31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 FAM83BQ5T0W9 1011 aa31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 LSG1Q9H089 658 aaKnown RBP31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 U3KPZ7 1027 aaPredicted RBP31.32■■■□□ 2.6
GTF3C4-202ENST00000483873 FMNL1O95466 1100 aaPredicted RBP31.31■■■□□ 2.6
GTF3C4-202ENST00000483873 FBXO46Q6PJ61 603 aaPredicted RBP31.31■■■□□ 2.6
GTF3C4-202ENST00000483873 MAP4K1Q92918 833 aa31.31■■■□□ 2.6
GTF3C4-202ENST00000483873 B4E1Z4 1266 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 CNMDO75829 334 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 CYP21A2P08686 494 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 COG2Q14746 738 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 ARHGEF6Q15052 776 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 FBXO28Q9NVF7 368 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 PTPN22Q9Y2R2 807 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 RBM8AQ9Y5S9 174 aaKnown RBP31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 TAF6LQ9Y6J9 622 aa31.3■■■□□ 2.6
GTF3C4-202ENST00000483873 FLOT1O75955 427 aa31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 FCGRTP55899 365 aa31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 Q3C1V9 767 aa31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 SAMD1Q6SPF0 538 aaPredicted RBP31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 LBX2Q6XYB7 198 aa31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 GTF3C2Q8WUA4 911 aaPredicted RBP31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 ESR2Q92731 530 aa31.29■■■□□ 2.6
GTF3C4-202ENST00000483873 KDM4AO75164 1064 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 NOVP48745 357 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 ERVK-9P63128 1117 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 ERVK-24P63145 666 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 KIAA1211Q6ZU35 1233 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 TCP11L1Q9NUJ3 509 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 BTBD7Q9P203 1132 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 SYNPO2Q9UMS6 1093 aa31.28■■■□□ 2.6
GTF3C4-202ENST00000483873 DSG3P32926 999 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 GMCL1P1Q8NEA9 526 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 GPRC5AQ8NFJ5 357 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 CHMP4CQ96CF2 233 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 ATG4CQ96DT6 458 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 ZKSCAN3Q9BRR0 538 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 HPS5Q9UPZ3 1129 aa31.27■■■□□ 2.6
GTF3C4-202ENST00000483873 RABGAP1Q9Y3P9 1069 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms