RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 A0A0G2JMZ2 1700 aa23.82■■□□□ 1.4
HPS4-213ENST00000483631 RNF113AO15541 343 aaKnown RBP23.82■■□□□ 1.4
HPS4-213ENST00000483631 AKR1B1P15121 316 aa23.82■■□□□ 1.4
HPS4-213ENST00000483631 ICA1Q05084 483 aa23.82■■□□□ 1.4
HPS4-213ENST00000483631 APBA2Q99767 749 aa23.82■■□□□ 1.4
HPS4-213ENST00000483631 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
HPS4-213ENST00000483631 GNAT2P19087 354 aa23.81■■□□□ 1.4
HPS4-213ENST00000483631 MB21D1Q8N884 522 aa23.81■■□□□ 1.4
HPS4-213ENST00000483631 VCPKMTQ9H867 229 aa23.81■■□□□ 1.4
HPS4-213ENST00000483631 KANSL2Q9H9L4 492 aa23.81■■□□□ 1.4
HPS4-213ENST00000483631 CWC22Q9HCG8 908 aaKnown RBP23.81■■□□□ 1.4
HPS4-213ENST00000483631 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
HPS4-213ENST00000483631 SLC15A5A6NIM6 579 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 MAP2K5Q13163 448 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 HABP4Q5JVS0 413 aaKnown RBP23.8■■□□□ 1.4
HPS4-213ENST00000483631 SIAH1Q8IUQ4 282 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 DPF3Q92784 378 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 OSBP2Q969R2 916 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 BTBD7Q9P203 1132 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 PARP14Q460N5 1801 aa23.8■■□□□ 1.4
HPS4-213ENST00000483631 ROBO3Q96MS0 1386 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 CYP2D7A0A087X1C5 515 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 GSG1L2A8MUP6 293 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 NR2E3Q9Y5X4 410 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 IVNS1ABPQ9Y6Y0 642 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 ZNF236Q9UL36 1845 aa23.79■■□□□ 1.4
HPS4-213ENST00000483631 H0YGN5 161 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 WDR46O15213 610 aaKnown RBP23.78■■□□□ 1.4
HPS4-213ENST00000483631 HOXC6P09630 235 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 PRKAR2AP13861 404 aaKnown RBP23.78■■□□□ 1.4
HPS4-213ENST00000483631 PTPREP23469 700 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 TRIM32Q13049 653 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 AAMPQ13685 434 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 SHCBP1Q8NEM2 672 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 PI4K2BQ8TCG2 481 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 TANGO6Q9C0B7 1094 aa23.78■■□□□ 1.4
HPS4-213ENST00000483631 GPAA1O43292 621 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 DSG3P32926 999 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 GRB14Q14449 540 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 TSHZ3Q63HK5 1081 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 NECAB2Q7Z6G3 386 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 OGDHLQ9ULD0 1010 aa23.77■■□□□ 1.4
HPS4-213ENST00000483631 SMIM22K7EJ46 135 aa23.76■■□□□ 1.39
HPS4-213ENST00000483631 STRNO43815 780 aa23.76■■□□□ 1.39
HPS4-213ENST00000483631 KIAA1755Q5JYT7 1200 aa23.76■■□□□ 1.39
HPS4-213ENST00000483631 SPATC1LQ9H0A9 340 aa23.76■■□□□ 1.39
HPS4-213ENST00000483631 ZNF287Q9HBT7 754 aa23.76■■□□□ 1.39
HPS4-213ENST00000483631 EEF2P13639 858 aaKnown RBP23.75■■□□□ 1.39
HPS4-213ENST00000483631 MX1P20591 662 aa23.75■■□□□ 1.39
HPS4-213ENST00000483631 CACNB2Q08289 660 aaPredicted RBP23.75■■□□□ 1.39
HPS4-213ENST00000483631 GOPCQ9HD26 462 aa23.75■■□□□ 1.39
HPS4-213ENST00000483631 FLOT1O75955 427 aa23.74■■□□□ 1.39
HPS4-213ENST00000483631 HDAC1Q13547 482 aaPredicted RBP23.74■■□□□ 1.39
HPS4-213ENST00000483631 WDR78Q5VTH9 848 aa23.74■■□□□ 1.39
HPS4-213ENST00000483631 CLEC10AQ8IUN9 316 aa23.74■■□□□ 1.39
HPS4-213ENST00000483631 PAWRQ96IZ0 340 aaKnown RBP23.74■■□□□ 1.39
HPS4-213ENST00000483631 MOV10L1Q9BXT6 1211 aaKnown RBP23.74■■□□□ 1.39
HPS4-213ENST00000483631 ZBTB47Q9UFB7 747 aaPredicted RBP23.74■■□□□ 1.39
HPS4-213ENST00000483631 TRIOBPQ9H2D6 2365 aa23.74■■□□□ 1.39
HPS4-213ENST00000483631 SALL3Q9BXA9 1300 aa23.74■■□□□ 1.39
HPS4-213ENST00000483631 ALPK3Q96L96 1907 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 PATL2C9JE40 543 aaKnown RBP23.73■■□□□ 1.39
HPS4-213ENST00000483631 CCL14Q16627 93 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 MFSD14CQ5VZR4 134 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 ABRAQ8N0Z2 381 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 CRBNQ96SW2 442 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.73■■□□□ 1.39
HPS4-213ENST00000483631 NBPF3Q9H094 633 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 MROH8Q9H579 483 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 MKNK2Q9HBH9 465 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 ADAMTS5Q9UNA0 930 aa23.73■■□□□ 1.39
HPS4-213ENST00000483631 COLQQ9Y215 455 aaPredicted RBP23.73■■□□□ 1.39
HPS4-213ENST00000483631 RASA1P20936 1047 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 TDO2P48775 406 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 TICAM2Q86XR7 235 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 SPICE1Q8N0Z3 855 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 FSD1Q9BTV5 496 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 NACAP1Q9BZK3 213 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
HPS4-213ENST00000483631 NYAP2Q9P242 653 aa23.72■■□□□ 1.39
HPS4-213ENST00000483631 COL11A1P12107 1806 aaPredicted RBP23.71■■□□□ 1.39
HPS4-213ENST00000483631 MINDY4BA8MYZ0 360 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 M0R2C6 588 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 EVI5O60447 810 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 IGHA2P01877 340 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 ZMYM1Q5SVZ6 1142 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 IFNL3Q8IZI9 196 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 OTUD7AQ8TE49 926 aaPredicted RBP23.71■■□□□ 1.39
HPS4-213ENST00000483631 SYNPO2Q9UMS6 1093 aa23.71■■□□□ 1.39
HPS4-213ENST00000483631 FRMPD3Q5JV73 1810 aa23.7■■□□□ 1.39
HPS4-213ENST00000483631 MSCO60682 206 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 SLC25A27O95847 323 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 ERCC3P19447 782 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
HPS4-213ENST00000483631 ATP2B2Q01814 1243 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 ATG4CQ96DT6 458 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 SLC5A4Q9NY91 659 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 STAP2Q9UGK3 403 aa23.7■■□□□ 1.38
HPS4-213ENST00000483631 ZNFX1Q9P2E3 1918 aaKnown RBP23.7■■□□□ 1.38
HPS4-213ENST00000483631 MYH4Q9Y623 1939 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms