RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 CEP95Q96GE4 821 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 NBPF3Q9H094 633 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 TOMM22Q9NS69 142 aa15.89■□□□□ 0.13
SSR1-208ENST00000483409 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 RANBP6O60518 1105 aaKnown RBP15.88■□□□□ 0.13
SSR1-208ENST00000483409 CTGFP29279 349 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 TBC1D10CQ8IV04 446 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 NEDD1Q8NHV4 660 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 ABHD8Q96I13 439 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 TANGO6Q9C0B7 1094 aa15.88■□□□□ 0.13
SSR1-208ENST00000483409 COL11A1P12107 1806 aaPredicted RBP15.88■□□□□ 0.13
SSR1-208ENST00000483409 ZNF213O14771 459 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 SGSM2O43147 1006 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 ORC4O43929 436 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 PEX10O60683 326 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 PSMC4P43686 418 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 PKN2Q16513 984 aaKnown RBP15.87■□□□□ 0.13
SSR1-208ENST00000483409 FAM110CQ1W6H9 321 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 AKNAD1Q5T1N1 836 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 CATSPERGQ6ZRH7 1159 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 LPAR1Q92633 364 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 GOPCQ9HD26 462 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 MTMR4Q9NYA4 1195 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 NYAP2Q9P242 653 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 CLIP2Q9UDT6 1046 aa15.87■□□□□ 0.13
SSR1-208ENST00000483409 A0A0G2JMZ2 1700 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 NMT2O60551 498 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 FMNL1O95466 1100 aaPredicted RBP15.86■□□□□ 0.13
SSR1-208ENST00000483409 TTLL1O95922 423 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 FGRP09769 529 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 PTH1RQ03431 593 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 ARHGEF6Q15052 776 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 FBXO46Q6PJ61 603 aaPredicted RBP15.86■□□□□ 0.13
SSR1-208ENST00000483409 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 LRRC47Q8N1G4 583 aaKnown RBP15.86■□□□□ 0.13
SSR1-208ENST00000483409 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 PAGR1Q9BTK6 254 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 TXNRD2Q9NNW7 524 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 CTNNA3Q9UI47 895 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 HTTP42858 3142 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 NEDD4P46934 1319 aa15.86■□□□□ 0.13
SSR1-208ENST00000483409 WDR46O15213 610 aaKnown RBP15.85■□□□□ 0.13
SSR1-208ENST00000483409 CAPN15O75808 1086 aa15.85■□□□□ 0.13
SSR1-208ENST00000483409 FCGRTP55899 365 aa15.85■□□□□ 0.13
SSR1-208ENST00000483409 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
SSR1-208ENST00000483409 POTEEQ6S8J3 1075 aa15.85■□□□□ 0.13
SSR1-208ENST00000483409 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
SSR1-208ENST00000483409 RNF41Q9H4P4 317 aaPredicted RBP15.85■□□□□ 0.13
SSR1-208ENST00000483409 HPS5Q9UPZ3 1129 aa15.85■□□□□ 0.13
SSR1-208ENST00000483409 PTPN22Q9Y2R2 807 aa15.85■□□□□ 0.13
SSR1-208ENST00000483409 SPDYE16A6NNV3 312 aaPredicted RBP15.84■□□□□ 0.13
SSR1-208ENST00000483409 NDUFB10O96000 172 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 FAM83BQ5T0W9 1011 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 NKX2-3Q8TAU0 364 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 GTF3C2Q8WUA4 911 aaPredicted RBP15.84■□□□□ 0.13
SSR1-208ENST00000483409 NUP88Q99567 741 aaPredicted RBP15.84■□□□□ 0.13
SSR1-208ENST00000483409 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 IL17RBQ9NRM6 502 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 RBPJLQ9UBG7 517 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 MORF4L1Q9UBU8 362 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 PLXNB2O15031 1838 aa15.84■□□□□ 0.13
SSR1-208ENST00000483409 CENPFP49454 3210 aa15.83■□□□□ 0.13
SSR1-208ENST00000483409 F5H6K3 240 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 FLOT1O75955 427 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 PCP11498 1178 aaKnown RBP15.83■□□□□ 0.12
SSR1-208ENST00000483409 ERVK-9P63128 1117 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 ERVK-24P63145 666 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 KLRC3Q07444 240 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 COG2Q14746 738 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 GPRC5AQ8NFJ5 357 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 MKL1Q969V6 931 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 PTCH2Q9Y6C5 1203 aa15.83■□□□□ 0.12
SSR1-208ENST00000483409 B4E1Z4 1266 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 TNPO2O14787 897 aaKnown RBP15.82■□□□□ 0.12
SSR1-208ENST00000483409 CNMDO75829 334 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 GNRH1P01148 92 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 Q3C1V9 767 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 FBXO28Q9NVF7 368 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 SRRDQ9UH36 339 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 RABGAP1Q9Y3P9 1069 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
SSR1-208ENST00000483409 MYPNQ86TC9 1320 aa15.82■□□□□ 0.12
SSR1-208ENST00000483409 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 CDC45O75419 566 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 HOXD10P28358 340 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 DSG3P32926 999 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 PRKCZQ05513 592 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 KIAA1211Q6ZU35 1233 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 GMCL1P1Q8NEA9 526 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 ESR2Q92731 530 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
SSR1-208ENST00000483409 HOXC10Q9NYD6 342 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms