RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 C19orf81C9J6K1 198 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 HMGB1P09429 215 aaKnown RBP23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 USP14P54578 494 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 CCDC178Q5BJE1 867 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 TMEM67Q5HYA8 995 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 IFIT1BQ5T764 474 aaKnown RBP23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 BRI3BPQ8WY22 251 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 IL17RAQ96F46 866 aa23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 UPF3BQ9BZI7 483 aaKnown RBP23.39■■□□□ 1.34
TRAPPC12-220ENST00000482645 RABEP1Q15276 862 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 RCSD1Q6JBY9 416 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 USP17L2Q6R6M4 530 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 DHX32Q7L7V1 743 aaKnown RBP23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 TMEM47Q9BQJ4 181 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 GOPCQ9HD26 462 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 EMILIN3Q9NT22 766 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 TOP1P11387 765 aaKnown RBP23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 FGD1P98174 961 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 SREBF2Q12772 1141 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 WTAPQ15007 396 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 TTC14Q96N46 770 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 KAT14Q9H8E8 782 aa23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 GPHNQ9NQX3 736 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 ISY1Q9ULR0 285 aaKnown RBP23.38■■□□□ 1.33
TRAPPC12-220ENST00000482645 FASTKD5Q7L8L6 764 aaKnown RBP23.37■■□□□ 1.33
TRAPPC12-220ENST00000482645 MKL1Q969V6 931 aa23.37■■□□□ 1.33
TRAPPC12-220ENST00000482645 VCPKMTQ9H867 229 aa23.37■■□□□ 1.33
TRAPPC12-220ENST00000482645 CYP46A1Q9Y6A2 500 aa23.37■■□□□ 1.33
TRAPPC12-220ENST00000482645 RPS6KB1P23443 525 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 MAP2K2P36507 400 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 SEC23AQ15436 765 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 SH3D19Q5HYK7 790 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 KIAA1755Q5JYT7 1200 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 TREML2Q5T2D2 321 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 RUFY3Q7L099 469 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 TMEM87BQ96K49 555 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 SENP2Q9HC62 589 aa23.36■■□□□ 1.33
TRAPPC12-220ENST00000482645 F5H6K3 240 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 VCAM1P19320 739 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 NOVP48745 357 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 KLRC3Q07444 240 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 MOGSQ13724 837 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 NFXL1Q6ZNB6 911 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 PROCA1Q8NCQ7 364 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 IGDCC4Q8TDY8 1250 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 PTPN18Q99952 460 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 LOC285556D6RIA3 1793 aa23.35■■□□□ 1.33
TRAPPC12-220ENST00000482645 BTBD19C9JJ37 291 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 SH2B2O14492 632 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 NDUFB10O96000 172 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 EXOSC10Q01780 885 aaKnown RBP23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 SLFN13Q68D06 897 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 DNAJC5GQ8N7S2 189 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 PNMA1Q8ND90 353 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 NUP88Q99567 741 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 LY9Q9HBG7 655 aa23.34■■□□□ 1.33
TRAPPC12-220ENST00000482645 IGF2BP3O00425 579 aaKnown RBP eCLIP23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 ANP32AP39687 249 aaKnown RBP23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 NEK4P51957 841 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 INHBEP58166 350 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 FAM43AQ8N2R8 423 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 LPAR1Q92633 364 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 AGTPBP1Q9UPW5 1226 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 WDR19Q8NEZ3 1342 aa23.33■■□□□ 1.33
TRAPPC12-220ENST00000482645 TESPA1A2RU30 521 aaPredicted RBP23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 Q6ZUG5 572 aa23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 IFNL1Q8IU54 200 aa23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 GMCL1P1Q8NEA9 526 aa23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 C12orf42Q96LP6 360 aa23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 TANGO6Q9C0B7 1094 aa23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 RPAP3Q9H6T3 665 aaPredicted RBP23.33■■□□□ 1.32
TRAPPC12-220ENST00000482645 CCDC69A6NI79 296 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 PDHXO00330 501 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 TM4SF4P48230 202 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 FAM83BQ5T0W9 1011 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 GPAT2Q6NUI2 795 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 ANKS1AQ92625 1134 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 MTA3Q9BTC8 594 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 PDRG1Q9NUG6 133 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 SYNPO2Q9UMS6 1093 aa23.32■■□□□ 1.32
TRAPPC12-220ENST00000482645 THSD7BQ9C0I4 1608 aa23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 SLC1A4P43007 532 aa23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 CCDC96Q2M329 555 aa23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 OTUD7BQ6GQQ9 843 aa23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 ANKRD23Q86SG2 305 aa23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 NAP1L2Q9ULW6 460 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC12-220ENST00000482645 WDR46O15213 610 aaKnown RBP23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 CATIPQ7Z7H3 387 aa23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 RAB11FIP4Q86YS3 637 aa23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 REM2Q8IYK8 340 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 BRF1Q92994 677 aa23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC12-220ENST00000482645 ST18O60284 1047 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 LIFRP42702 1097 aa23.29■■□□□ 1.32
TRAPPC12-220ENST00000482645 IRX3P78415 501 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms