RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SH2D4AQ9H788 454 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 ARHGEF10LQ9HCE6 1279 aa16.16■□□□□ 0.18
CTDSP1-208ENST00000482272 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 EVI5O60447 810 aa16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 PRKAR2AP13861 404 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 PAWRQ96IZ0 340 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
CTDSP1-208ENST00000482272 SLC15A5A6NIM6 579 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 AKR1B1P15121 316 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 PTPREP23469 700 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 MAP2K5Q13163 448 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 C16orf86Q6ZW13 317 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 LPAR1Q92633 364 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 APBA2Q99767 749 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
CTDSP1-208ENST00000482272 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 ICA1Q05084 483 aa16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 LRRFIP1Q32MZ4 808 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 OSBP2Q969R2 916 aa16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 STRBPQ96SI9 672 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 KANSL2Q9H9L4 492 aa16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
CTDSP1-208ENST00000482272 ERC2O15083 957 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 STRNO43815 780 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 CCL14Q16627 93 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 MB21D1Q8N884 522 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 APPBP2Q92624 585 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 VCPKMTQ9H867 229 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 OGDHLQ9ULD0 1010 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CTDSP1-208ENST00000482272 COL11A1P12107 1806 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 EEF2P13639 858 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 DSG3P32926 999 aa16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 SBK1Q52WX2 424 aa16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 MFSD14CQ5VZR4 134 aa16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 DIS3LQ8TF46 1054 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 EPB41L4AQ9HCS5 686 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
CTDSP1-208ENST00000482272 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 M0R2C6 588 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 WDR46O15213 610 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 FLOT1O75955 427 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 GNAT2P19087 354 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 DPP9Q86TI2 863 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 MKNK2Q9HBH9 465 aa16.1■□□□□ 0.17
CTDSP1-208ENST00000482272 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 APPP05067 770 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 HOXC6P09630 235 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 CCND3P30281 292 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 FXR1P51114 621 aaKnown RBP eCLIP16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 GRB14Q14449 540 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 PLS1Q14651 629 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 MROH8Q9H579 483 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 ZNF287Q9HBT7 754 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 SLC5A4Q9NY91 659 aa16.09■□□□□ 0.17
CTDSP1-208ENST00000482272 PATL2C9JE40 543 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 RAD21O60216 631 aa16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 ERCC3P19447 782 aa16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 NPLOC4Q8TAT6 608 aa16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.16
CTDSP1-208ENST00000482272 GPAA1O43292 621 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 CNGA1P29973 690 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 TDO2P48775 406 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 LHX8Q68G74 356 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 NCAPG2Q86XI2 1143 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
CTDSP1-208ENST00000482272 ROBO3Q96MS0 1386 aa16.06■□□□□ 0.16
CTDSP1-208ENST00000482272 MSCO60682 206 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms