RNA–Protein interactions for RNA: ENST00000481356.1

SRPRB-203, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 1,487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-203ENST00000481356 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 FCGRTP55899 365 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 CATSPERGQ6ZRH7 1159 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 IL25Q9H293 177 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 SRRDQ9UH36 339 aa13.19□□□□□ -0.3
SRPRB-203ENST00000481356 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
SRPRB-203ENST00000481356 CNMDO75829 334 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
SRPRB-203ENST00000481356 GCLCP48506 637 aaPredicted RBP13.18□□□□□ -0.3
SRPRB-203ENST00000481356 HAND2P61296 217 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 Q3C1V9 767 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
SRPRB-203ENST00000481356 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
SRPRB-203ENST00000481356 FGAP02671 866 aa13.17□□□□□ -0.3
SRPRB-203ENST00000481356 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
SRPRB-203ENST00000481356 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
SRPRB-203ENST00000481356 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
SRPRB-203ENST00000481356 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
SRPRB-203ENST00000481356 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
SRPRB-203ENST00000481356 ZNFX1Q9P2E3 1918 aaKnown RBP13.17□□□□□ -0.3
SRPRB-203ENST00000481356 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
SRPRB-203ENST00000481356 FLT3LGP49771 235 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 ERVK-24P63145 666 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 TFAP4Q01664 338 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 PDE4BQ07343 736 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 RRP12Q5JTH9 1297 aaKnown RBP13.16□□□□□ -0.3
SRPRB-203ENST00000481356 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
SRPRB-203ENST00000481356 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 PORCNQ9H237 461 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 BTBD7Q9P203 1132 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRPRB-203ENST00000481356 NMT2O60551 498 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
SRPRB-203ENST00000481356 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 ELNP15502 786 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 HOXD10P28358 340 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 ALX1Q15699 326 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 ARMC5Q96C12 935 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 FBXO28Q9NVF7 368 aa13.16□□□□□ -0.3
SRPRB-203ENST00000481356 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
SRPRB-203ENST00000481356 GNRH1P01148 92 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 MTFR1Q15390 333 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 COA7Q96BR5 231 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 SH2D4AQ9H788 454 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
SRPRB-203ENST00000481356 ADCY3O60266 1144 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 FLOT1O75955 427 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 GRK4P32298 578 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 PRMT2P55345 433 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
SRPRB-203ENST00000481356 ANAPC4Q9UJX5 808 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
SRPRB-203ENST00000481356 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 HIP1O00291 1037 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
SRPRB-203ENST00000481356 NDUFB10O96000 172 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 COG2Q14746 738 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
SRPRB-203ENST00000481356 CCAR1Q8IX12 1150 aaKnown RBP13.13□□□□□ -0.31
SRPRB-203ENST00000481356 LPAR1Q92633 364 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 CWC22Q9HCG8 908 aaKnown RBP13.13□□□□□ -0.31
SRPRB-203ENST00000481356 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 RABGAP1Q9Y3P9 1069 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 NEDD4P46934 1319 aa13.13□□□□□ -0.31
SRPRB-203ENST00000481356 F5H6K3 240 aa13.12□□□□□ -0.31
SRPRB-203ENST00000481356 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
SRPRB-203ENST00000481356 CYP2B6P20813 491 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms