RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 CD96P40200 585 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 GIPRP48546 466 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
CALD1-219ENST00000480638 INTS3Q68E01 1043 aaKnown RBP8.43□□□□□ -1.06
CALD1-219ENST00000480638 RUFY4Q6ZNE9 571 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 SPRED2Q7Z698 418 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 TMEM192Q8IY95 271 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 SHDQ96IW2 340 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 SLC6A18Q96N87 628 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 PAK6Q9NQU5 681 aaPredicted RBP8.43□□□□□ -1.06
CALD1-219ENST00000480638 SEMA3GQ9NS98 782 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 FAM86C2PA6NEL3 165 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 LRRN2O75325 713 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 CLEC3AO75596 197 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 CD8BP10966 210 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 RNF4P78317 190 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 OR6P1Q8NGX9 317 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 CPLX3Q8WVH0 158 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 ASB11Q8WXH4 323 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 KCNH3Q9ULD8 1083 aa8.42□□□□□ -1.06
CALD1-219ENST00000480638 NBPF12Q5TAG4 269 aaPredicted RBP8.41□□□□□ -1.06
CALD1-219ENST00000480638 THAP5Q7Z6K1 395 aa8.41□□□□□ -1.06
CALD1-219ENST00000480638 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
CALD1-219ENST00000480638 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
CALD1-219ENST00000480638 ZYXQ15942 572 aaKnown RBP8.4□□□□□ -1.06
CALD1-219ENST00000480638 TP53INP2Q8IXH6 220 aa8.4□□□□□ -1.06
CALD1-219ENST00000480638 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
CALD1-219ENST00000480638 FGRP09769 529 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 SRFP11831 508 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 IKZF1Q13422 519 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 ANGEL2Q5VTE6 544 aaKnown RBP8.39□□□□□ -1.07
CALD1-219ENST00000480638 UNC5AQ6ZN44 842 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 C19orf47Q8N9M1 422 aaKnown RBP8.39□□□□□ -1.07
CALD1-219ENST00000480638 SLC43A3Q8NBI5 491 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 AGBL5Q8NDL9 886 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 GPR62Q9BZJ7 368 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 DUSP15Q9H1R2 295 aaPredicted RBP8.39□□□□□ -1.07
CALD1-219ENST00000480638 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
CALD1-219ENST00000480638 SUCOQ9UBS9 1254 aaKnown RBP8.39□□□□□ -1.07
CALD1-219ENST00000480638 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
CALD1-219ENST00000480638 DNAJA1P31689 397 aaKnown RBP8.38□□□□□ -1.07
CALD1-219ENST00000480638 ARID5AQ03989 594 aa8.38□□□□□ -1.07
CALD1-219ENST00000480638 FAM169BQ8N8A8 192 aa8.38□□□□□ -1.07
CALD1-219ENST00000480638 UBE2FQ969M7 185 aa8.38□□□□□ -1.07
CALD1-219ENST00000480638 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
CALD1-219ENST00000480638 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.38□□□□□ -1.07
CALD1-219ENST00000480638 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
CALD1-219ENST00000480638 TRIT1Q9H3H1 467 aaKnown RBP8.38□□□□□ -1.07
CALD1-219ENST00000480638 SHISA3A0PJX4 238 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
CALD1-219ENST00000480638 FUT4P22083 530 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 PMS1P54277 932 aaKnown RBP8.37□□□□□ -1.07
CALD1-219ENST00000480638 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 NAALADL2Q58DX5 795 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 XP32Q5T750 250 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 TTC6Q86TZ1 520 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 PPFIBP1Q86W92 1011 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 DHRS1Q96LJ7 313 aa8.37□□□□□ -1.07
CALD1-219ENST00000480638 A0A1W2PQH9 124 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 C9IYK1 514 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 TPP2P29144 1249 aaPredicted RBP8.36□□□□□ -1.07
CALD1-219ENST00000480638 TDRD10Q5VZ19 366 aaKnown RBP8.36□□□□□ -1.07
CALD1-219ENST00000480638 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
CALD1-219ENST00000480638 MCF2L2Q86YR7 1114 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 GMLQ99445 158 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
CALD1-219ENST00000480638 LTBP3Q9NS15 1303 aa8.35□□□□□ -1.07
CALD1-219ENST00000480638 SNW1Q13573 536 aaKnown RBP8.35□□□□□ -1.07
CALD1-219ENST00000480638 PLCL1Q15111 1095 aa8.35□□□□□ -1.07
CALD1-219ENST00000480638 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
CALD1-219ENST00000480638 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
CALD1-219ENST00000480638 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
CALD1-219ENST00000480638 C8orf37Q96NL8 207 aa8.35□□□□□ -1.07
CALD1-219ENST00000480638 MRVI1Q9Y6F6 885 aa8.35□□□□□ -1.07
CALD1-219ENST00000480638 CASP7P55210 303 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 ZP2Q05996 745 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
CALD1-219ENST00000480638 PPP2R5EQ16537 467 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 TMPRSS7Q7RTY8 843 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 TMC3Q7Z5M5 1100 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
CALD1-219ENST00000480638 ASCC2Q9H1I8 757 aaPredicted RBP8.34□□□□□ -1.07
CALD1-219ENST00000480638 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
CALD1-219ENST00000480638 ZNF214Q9UL59 606 aaPredicted RBP8.34□□□□□ -1.07
CALD1-219ENST00000480638 ESR1P03372 595 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 PRDM14Q9GZV8 571 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 PHAXQ9H814 394 aaKnown RBP8.33□□□□□ -1.08
CALD1-219ENST00000480638 PRDM7Q9NQW5 492 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 DUSP13Q9UII6 198 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 PCDHB12Q9Y5F1 795 aa8.33□□□□□ -1.08
CALD1-219ENST00000480638 SHOXO15266 292 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms