RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 LIFRP42702 1097 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 JAG1P78504 1218 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 BLOC1S2Q6QNY1 142 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 SIAH1Q8IUQ4 282 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 MB21D2Q8IYB1 491 aaPredicted RBP9.69□□□□□ -0.86
USP54-212ENST00000480210 JMYQ8N9B5 988 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 BACH2Q9BYV9 841 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 IL17RBQ9NRM6 502 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 SAGE1Q9NXZ1 904 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 STX8Q9UNK0 236 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
USP54-212ENST00000480210 TNKSO95271 1327 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 MYPNQ86TC9 1320 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L13C9JLJ4 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 F5H6K3 240 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 PLA2G6O60733 806 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 HMGCS2P54868 508 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 EXOSC10Q01780 885 aaKnown RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 ATP2B2Q01814 1243 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 KLRC3Q07444 240 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 GRM1Q13255 1194 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 MTMR2Q13614 643 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 WTAPQ15007 396 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 IFIT1BQ5T764 474 aaKnown RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 GADL1Q6ZQY3 521 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 STOX1Q6ZVD7 989 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 ACER1Q8TDN7 264 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 DCAF4Q8WV16 495 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 CNKSR2Q8WXI2 1034 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 MAP3K14Q99558 947 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 TMEM47Q9BQJ4 181 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 KAT14Q9H8E8 782 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 ZFYVE28Q9HCC9 887 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.68□□□□□ -0.86
USP54-212ENST00000480210 CYP46A1Q9Y6A2 500 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 MYH6P13533 1939 aa9.68□□□□□ -0.86
USP54-212ENST00000480210 A0A1W2PRG0 241 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 BTBD19C9JJ37 291 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 PRC1O43663 620 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 AOC2O75106 756 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CALM1P0DP23 149 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CALM2P0DP24 149 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CALM3P0DP25 149 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 GCLCP48506 637 aaPredicted RBP9.67□□□□□ -0.86
USP54-212ENST00000480210 RCAN1P53805 252 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 HTRA3P83110 453 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 MOGSQ13724 837 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 SEC23AQ15436 765 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
USP54-212ENST00000480210 GPATCH4Q5T3I0 446 aaKnown RBP9.67□□□□□ -0.86
USP54-212ENST00000480210 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CATSPERGQ6ZRH7 1159 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 RUFY3Q7L099 469 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CYB5R4Q7L1T6 521 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 FAM160B2Q86V87 743 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 IGDCC4Q8TDY8 1250 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 BRI3BPQ8WY22 251 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 CHMP4CQ96CF2 233 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
USP54-212ENST00000480210 PARK7Q99497 189 aaKnown RBP9.67□□□□□ -0.86
USP54-212ENST00000480210 C22orf23Q9BZE7 217 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
USP54-212ENST00000480210 PARP14Q460N5 1801 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 PDHXO00330 501 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 SEC24BO95487 1268 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 BMP3P12645 472 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
USP54-212ENST00000480210 RPS6KB1P23443 525 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 SLC1A4P43007 532 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
USP54-212ENST00000480210 FGD1P98174 961 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 MKRN3Q13064 507 aaKnown RBP9.66□□□□□ -0.86
USP54-212ENST00000480210 COG2Q14746 738 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 ANKRD1Q15327 319 aa9.66□□□□□ -0.86
USP54-212ENST00000480210 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms