RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ACER1Q8TDN7 264 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 TMEM47Q9BQJ4 181 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 KAT14Q9H8E8 782 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 NCOA5Q9HCD5 579 aaKnown RBP7.53□□□□□ -1.2
HERC4-210ENST00000480158 PICK1Q9NRD5 415 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ZHX2Q9Y6X8 837 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 PCNTO95613 3336 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 A0A1W2PRG0 241 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 TRIM75PA6NK02 468 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 GOLGA8BA8MQT2 603 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.2
HERC4-210ENST00000480158 TTLL1O95922 423 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 ASNSP08243 561 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 IREB2P48200 963 aaKnown RBP7.52□□□□□ -1.2
HERC4-210ENST00000480158 MKRN3Q13064 507 aaKnown RBP7.52□□□□□ -1.2
HERC4-210ENST00000480158 CST9Q5W186 159 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 SIAH1Q8IUQ4 282 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 CMTR1Q8N1G2 835 aaKnown RBP7.52□□□□□ -1.2
HERC4-210ENST00000480158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.2
HERC4-210ENST00000480158 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 LIMCH1Q9UPQ0 1083 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 CSADQ9Y600 493 aa7.52□□□□□ -1.2
HERC4-210ENST00000480158 GOLGA8HP0CJ92 632 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 MAP3K9P80192 1104 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 SPP2Q13103 211 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 ANKRD1Q15327 319 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 E2F4Q16254 413 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 SYNE3Q6ZMZ3 975 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 SCYL3Q8IZE3 742 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 ZNF654Q8IZM8 581 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 PNMA1Q8ND90 353 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 TMX3Q96JJ7 454 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 FEZ1Q99689 392 aa7.52□□□□□ -1.21
HERC4-210ENST00000480158 GBA2Q9HCG7 927 aaPredicted RBP7.52□□□□□ -1.21
HERC4-210ENST00000480158 IGKV6D-41A0A0C4DH26 115 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 ZMYND10O75800 440 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 TOMM70O94826 608 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 HSP90AA1P07900 732 aaKnown RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 PTPRAP18433 802 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 PDIA3P30101 505 aaKnown RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 LIFRP42702 1097 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 GRM1Q13255 1194 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 APOA5Q6Q788 366 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 ARMC9Q7Z3E5 817 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 DGKHQ86XP1 1220 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 CCDC83Q8IWF9 413 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 C2orf69Q8N8R5 385 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 SMC1BQ8NDV3 1235 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 PIBF1Q8WXW3 757 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 SLKQ9H2G2 1235 aaPredicted RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 CPVLQ9H3G5 476 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 TCP11L1Q9NUJ3 509 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 ZNF112Q9UJU3 913 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 ZBTB43O43298 467 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 FRMPD2Q68DX3 1309 aaPredicted RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 USP17L2Q6R6M4 530 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 ZNF467Q7Z7K2 595 aaPredicted RBP7.51□□□□□ -1.21
HERC4-210ENST00000480158 ANKRD13AQ8IZ07 590 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 TMTC2Q8N394 836 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 WDR19Q8NEZ3 1342 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 AGXT2Q9BYV1 514 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
HERC4-210ENST00000480158 GOLGA8AA7E2F4 631 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 TOP1P11387 765 aaKnown RBP7.5□□□□□ -1.21
HERC4-210ENST00000480158 METAP2P50579 478 aaKnown RBP eCLIP7.5□□□□□ -1.21
HERC4-210ENST00000480158 SCRN1Q12765 414 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 MTMR2Q13614 643 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 BECN1Q14457 450 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 KCTD1Q719H9 257 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 SNX21Q969T3 373 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 MFRPQ9BY79 579 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 GPCPD1Q9NPB8 672 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 HPS5Q9UPZ3 1129 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 F5H6K3 240 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 CDC27P30260 824 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 MCM2P49736 904 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 HUNKP57058 714 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 KLRC3Q07444 240 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 TROAPQ12815 778 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 CCDC96Q2M329 555 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 CCDC178Q5BJE1 867 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 KIAA1755Q5JYT7 1200 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 STAG2Q8N3U4 1231 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 FANCBQ8NB91 859 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 DDX11Q96FC9 970 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 ALDH8A1Q9H2A2 487 aaPredicted RBP7.5□□□□□ -1.21
HERC4-210ENST00000480158 NYAP2Q9P242 653 aa7.5□□□□□ -1.21
HERC4-210ENST00000480158 ABT1Q9ULW3 272 aaKnown RBP7.5□□□□□ -1.21
HERC4-210ENST00000480158 MYH8P13535 1937 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms