RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ERVK-24P63145 666 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 CCL14Q16627 93 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-204ENST00000480055 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-204ENST00000480055 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 PORCNQ9H237 461 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 RBPJLQ9UBG7 517 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 SAP30BPQ9UHR5 308 aaKnown RBP12.64□□□□□ -0.39
SMURF1-204ENST00000480055 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 VCANP13611 3396 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 SPTBN5Q9NRC6 3674 aaKnown RBP12.63□□□□□ -0.39
SMURF1-204ENST00000480055 COL11A1P12107 1806 aaPredicted RBP12.63□□□□□ -0.39
SMURF1-204ENST00000480055 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 JAG1P78504 1218 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 ATF7IPQ6VMQ6 1270 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
SMURF1-204ENST00000480055 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
SMURF1-204ENST00000480055 FLT1P17948 1338 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 TRIM27P14373 513 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 EMP3P54852 163 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 Q3C1V9 767 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 PLEKHH3Q7Z736 793 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 SMCHD1A6NHR9 2005 aa12.62□□□□□ -0.39
SMURF1-204ENST00000480055 PRUNE2Q8WUY3 3088 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 PPP4CP60510 307 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
SMURF1-204ENST00000480055 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
SMURF1-204ENST00000480055 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 FEZ1Q99689 392 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
SMURF1-204ENST00000480055 DBNDD2Q9BQY9 259 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 ZBTB21Q9ULJ3 1066 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
SMURF1-204ENST00000480055 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
SMURF1-204ENST00000480055 BCAR3O75815 825 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 CNMDO75829 334 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 GH2P01242 217 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 CYP2E1P05181 493 aaPredicted RBP12.6□□□□□ -0.39
SMURF1-204ENST00000480055 CYP7A1P22680 504 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 USP5P45974 858 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 DYNLL1P63167 89 aaKnown RBP12.6□□□□□ -0.39
SMURF1-204ENST00000480055 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
SMURF1-204ENST00000480055 DNM1LO00429 736 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 MSCO60682 206 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 IDH1O75874 414 aaKnown RBP12.59□□□□□ -0.39
SMURF1-204ENST00000480055 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
SMURF1-204ENST00000480055 ZAP70P43403 619 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 CCNA1P78396 465 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 MIGA1Q8NAN2 632 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 LPAR1Q92633 364 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 C12orf42Q96LP6 360 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
SMURF1-204ENST00000480055 GPR108Q9NPR9 543 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
SMURF1-204ENST00000480055 DDX20Q9UHI6 824 aaKnown RBP12.59□□□□□ -0.39
SMURF1-204ENST00000480055 RABGAP1Q9Y3P9 1069 aa12.59□□□□□ -0.39
SMURF1-204ENST00000480055 SLC15A5A6NIM6 579 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 IGHA2P01877 340 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 HOXC6P09630 235 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 CNGA1P29973 690 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 RTP1P59025 263 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
SMURF1-204ENST00000480055 CDX2Q99626 313 aaPredicted RBP12.58□□□□□ -0.4
SMURF1-204ENST00000480055 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
SMURF1-204ENST00000480055 CYBAP13498 195 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 PTPREP23469 700 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 USP14P54578 494 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 ATP8B2P98198 1209 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 ATP2B2Q01814 1243 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 GRB14Q14449 540 aa12.57□□□□□ -0.4
SMURF1-204ENST00000480055 CERKLQ49MI3 558 aaPredicted RBP12.57□□□□□ -0.4
SMURF1-204ENST00000480055 ZKSCAN2Q63HK3 967 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms