RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 RIN2Q8WYP3 895 aaPredicted RBP12.28□□□□□ -0.44
CHD6-208ENST00000480022 SNRKQ9NRH2 765 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 INTS13Q9NVM9 706 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.44
CHD6-208ENST00000480022 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 GOLGA6CA6NDK9 693 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 GOLGA6DP0CG33 693 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 MCM3P25205 808 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 KRT32Q14532 448 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 STK38Q15208 465 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 WLSQ5T9L3 541 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 Q6ZUG5 572 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 CLASRPQ8N2M8 674 aaKnown RBP12.27□□□□□ -0.44
CHD6-208ENST00000480022 CNBD1Q8NA66 436 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 GOLGA6AQ9NYA3 693 aa12.27□□□□□ -0.44
CHD6-208ENST00000480022 ZC3H4Q9UPT8 1303 aaKnown RBP12.27□□□□□ -0.45
CHD6-208ENST00000480022 SPECC1LQ69YQ0 1117 aa12.27□□□□□ -0.45
CHD6-208ENST00000480022 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
CHD6-208ENST00000480022 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.45
CHD6-208ENST00000480022 NOA1Q8NC60 698 aaKnown RBP12.27□□□□□ -0.45
CHD6-208ENST00000480022 NSUN7Q8NE18 718 aaKnown RBP12.27□□□□□ -0.45
CHD6-208ENST00000480022 CCDC148Q8NFR7 591 aa12.27□□□□□ -0.45
CHD6-208ENST00000480022 COG1Q8WTW3 980 aa12.27□□□□□ -0.45
CHD6-208ENST00000480022 GGCXP38435 758 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 MTF1Q14872 753 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 SPATS2Q86XZ4 545 aaKnown RBP12.26□□□□□ -0.45
CHD6-208ENST00000480022 KCNG4Q8TDN1 519 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 CRACR2AQ9BSW2 395 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHD6-208ENST00000480022 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 IRS4O14654 1257 aaPredicted RBP12.26□□□□□ -0.45
CHD6-208ENST00000480022 ARHGAP25P42331 645 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 GNGT1P63211 74 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 LINC00301Q8NCQ3 95 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 EHD4Q9H223 541 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 RABEP2Q9H5N1 569 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 SAMM50Q9Y512 469 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 ABCC12Q96J65 1359 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
CHD6-208ENST00000480022 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 RAD21O60216 631 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 PTGER2P43116 358 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
CHD6-208ENST00000480022 OLFM4Q6UX06 510 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 NAPGQ99747 312 aaPredicted RBP12.25□□□□□ -0.45
CHD6-208ENST00000480022 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
CHD6-208ENST00000480022 A0A1B0GUA9 196 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 MEFVO15553 781 aaPredicted RBP12.25□□□□□ -0.45
CHD6-208ENST00000480022 TFRCP02786 760 aaKnown RBP12.25□□□□□ -0.45
CHD6-208ENST00000480022 POLD1P28340 1107 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 SLC10A5Q5PT55 438 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 SLC35F6Q8N357 371 aa12.25□□□□□ -0.45
CHD6-208ENST00000480022 A0A0D9SFI3 127 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 SOWAHDA6NJG2 315 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
CHD6-208ENST00000480022 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 YEATS4O95619 227 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 INHBEP58166 350 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 FOXO4P98177 505 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 GUCY1B3Q02153 619 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 CEP85LQ5SZL2 805 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 SPTLC2O15270 562 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
CHD6-208ENST00000480022 PFKFB1P16118 471 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 SSR1P43307 286 aaKnown RBP12.24□□□□□ -0.45
CHD6-208ENST00000480022 SMTNP53814 917 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 USP14P54578 494 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 ATP2B2Q01814 1243 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 CALR3Q96L12 384 aaKnown RBP12.24□□□□□ -0.45
CHD6-208ENST00000480022 PANX2Q96RD6 677 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 SPON1Q9HCB6 807 aa12.24□□□□□ -0.45
CHD6-208ENST00000480022 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 AGPSO00116 658 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 RTN2O75298 545 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 CTDNEP1O95476 244 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 CLNS1AP54105 237 aaKnown RBP12.23□□□□□ -0.45
CHD6-208ENST00000480022 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 RAD9BQ6WBX8 426 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 MICALCLQ6ZW33 695 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 NAA15Q9BXJ9 866 aaKnown RBP12.23□□□□□ -0.45
CHD6-208ENST00000480022 CLIC4Q9Y696 253 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 A0A0U1RQJ8 604 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 A6NNZ2 444 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
CHD6-208ENST00000480022 PDE8AO60658 829 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 GRIK3Q13003 919 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 EXOC8Q8IYI6 725 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 ATRIPQ8WXE1 791 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 BSDC1Q9NW68 430 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms