RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.29
CCDC58-205ENST00000479899 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
CCDC58-205ENST00000479899 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 SAP30BPQ9UHR5 308 aaKnown RBP13.21□□□□□ -0.29
CCDC58-205ENST00000479899 OGDHLQ9ULD0 1010 aa13.21□□□□□ -0.29
CCDC58-205ENST00000479899 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.3
CCDC58-205ENST00000479899 PFASO15067 1338 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 MAP4K4O95819 1239 aaPredicted RBP13.2□□□□□ -0.3
CCDC58-205ENST00000479899 ASNSP08243 561 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
CCDC58-205ENST00000479899 BACE1P56817 501 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 CCL14Q16627 93 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 NUDT18Q6ZVK8 323 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 TGFBRAP1Q8WUH2 860 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 PI4KBQ9UBF8 816 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
CCDC58-205ENST00000479899 FLT1P17948 1338 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 ZMYND10O75800 440 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 BAG3O95817 575 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-205ENST00000479899 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-205ENST00000479899 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC58-205ENST00000479899 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
CCDC58-205ENST00000479899 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 WDR18Q9BV38 432 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 PORCNQ9H237 461 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 DNAJC18Q9H819 358 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-205ENST00000479899 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
CCDC58-205ENST00000479899 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 RGS2P41220 211 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 ERVK-24P63145 666 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
CCDC58-205ENST00000479899 MTX1Q13505 466 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 LRRC26Q2I0M4 334 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 FEZ1Q99689 392 aa13.18□□□□□ -0.3
CCDC58-205ENST00000479899 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
CCDC58-205ENST00000479899 GOLGA8CPA6NN73 597 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 SMAPO00193 183 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 GNAI2P04899 355 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-205ENST00000479899 MAPK4P31152 587 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-205ENST00000479899 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
CCDC58-205ENST00000479899 LRIT3Q3SXY7 679 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 FRAT1Q92837 279 aaPredicted RBP13.17□□□□□ -0.3
CCDC58-205ENST00000479899 APBA2Q99767 749 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 MYH1P12882 1939 aa13.17□□□□□ -0.3
CCDC58-205ENST00000479899 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 OATP04181 439 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
CCDC58-205ENST00000479899 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 Q3C1V9 767 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 USP17L2Q6R6M4 530 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
CCDC58-205ENST00000479899 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
CCDC58-205ENST00000479899 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
CCDC58-205ENST00000479899 GH2P01242 217 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 COL6A1P12109 1028 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
CCDC58-205ENST00000479899 CNGA1P29973 690 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 MORN1Q5T089 497 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 MTMR10Q9NXD2 777 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
CCDC58-205ENST00000479899 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 TRIM27P14373 513 aa13.14□□□□□ -0.31
CCDC58-205ENST00000479899 CYP7A1P22680 504 aa13.14□□□□□ -0.31
CCDC58-205ENST00000479899 ZAP70P43403 619 aa13.14□□□□□ -0.31
CCDC58-205ENST00000479899 USP5P45974 858 aa13.14□□□□□ -0.31
CCDC58-205ENST00000479899 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 USP6NLQ92738 828 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms