RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 STIM1Q13586 685 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 TTF1Q15361 905 aaPredicted RBP23.36■■□□□ 1.33
COL13A1-208ENST00000479733 ANKLE2Q86XL3 938 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 GSDMAQ96QA5 445 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 AATFQ9NY61 560 aaKnown RBP eCLIP23.36■■□□□ 1.33
COL13A1-208ENST00000479733 PATL2C9JE40 543 aaKnown RBP23.36■■□□□ 1.33
COL13A1-208ENST00000479733 CCDC122Q5T0U0 273 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 MICALL1Q8N3F8 863 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 FANCBQ8NB91 859 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 RIPOR2Q9Y4F9 1068 aa23.36■■□□□ 1.33
COL13A1-208ENST00000479733 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 TCIRG1Q13488 830 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 SART3Q15020 963 aaKnown RBP23.35■■□□□ 1.33
COL13A1-208ENST00000479733 ADAMTS7Q9UKP4 1686 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 SPEF2Q9C093 1822 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 KCNJ18B7U540 433 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 ZNF185O15231 689 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 MYBL2P10244 700 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 KCNJ12Q14500 433 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 DNAJC21Q5F1R6 531 aaKnown RBP23.35■■□□□ 1.33
COL13A1-208ENST00000479733 CAGE1Q8TC20 777 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 EEF2KMTQ96G04 330 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 CRACR2AQ9BSW2 395 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 MYO1AQ9UBC5 1043 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 SAR1BQ9Y6B6 198 aa23.35■■□□□ 1.33
COL13A1-208ENST00000479733 PRPF6O94906 941 aaKnown RBP23.34■■□□□ 1.33
COL13A1-208ENST00000479733 MRPS25P82663 173 aaKnown RBP23.34■■□□□ 1.33
COL13A1-208ENST00000479733 TRAPPC11Q7Z392 1133 aa23.34■■□□□ 1.33
COL13A1-208ENST00000479733 SH3RF1Q7Z6J0 888 aa23.34■■□□□ 1.33
COL13A1-208ENST00000479733 EHD4Q9H223 541 aa23.34■■□□□ 1.33
COL13A1-208ENST00000479733 PHRF1Q9P1Y6 1649 aaKnown RBP23.34■■□□□ 1.33
COL13A1-208ENST00000479733 TTLL11Q8NHH1 800 aa23.34■■□□□ 1.33
COL13A1-208ENST00000479733 ISCA1Q9BUE6 129 aa23.34■■□□□ 1.33
COL13A1-208ENST00000479733 TCRBV5S4A2TA0A5A2 114 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 TTC26A0AVF1 554 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 TUBBP07437 444 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 E2F4Q16254 413 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 ZNF654Q8IZM8 581 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 NELFBQ8WX92 580 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 ITIH6Q6UXX5 1313 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 TCP11X2Q5H9J9 407 aa23.33■■□□□ 1.33
COL13A1-208ENST00000479733 TTC19Q6DKK2 380 aaPredicted RBP23.33■■□□□ 1.33
COL13A1-208ENST00000479733 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
COL13A1-208ENST00000479733 CCT5P48643 541 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 ANKRD20A12PQ8NF67 263 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 COG1Q8WTW3 980 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 KRT23Q9C075 422 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 LIMA1Q9UHB6 759 aaKnown RBP23.32■■□□□ 1.32
COL13A1-208ENST00000479733 GDAQ9Y2T3 454 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 XDHP47989 1333 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 SMIM22K7EJ46 135 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 FECHP22830 423 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 MIGA1Q8NAN2 632 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 CTCFLQ8NI51 663 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-208ENST00000479733 SEMA3EO15041 775 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 PAK1Q13153 545 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 MAP9Q49MG5 647 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
COL13A1-208ENST00000479733 TRIM49BA6NDI0 452 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 GSG1L2A8MUP6 293 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 LIG3P49916 1009 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 KIAA1328Q86T90 577 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 V9GY48 417 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-208ENST00000479733 MST1RQ04912 1400 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 MINDY4BA8MYZ0 360 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 AARSP49588 968 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL13A1-208ENST00000479733 PTGDRQ13258 359 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 UBAC1Q9BSL1 405 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 SLC4A4Q9Y6R1 1079 aa23.31■■□□□ 1.32
COL13A1-208ENST00000479733 CDHR2Q9BYE9 1310 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 FKBP15Q5T1M5 1219 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 JAKMIP2Q96AA8 810 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 SELENOOQ9BVL4 669 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 VIPAS39Q9H9C1 493 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 DUSP10Q9Y6W6 482 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 ECM29Q5VYK3 1845 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 RIC1Q4ADV7 1423 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 KRT2P35908 639 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 C2orf54Q08AI8 447 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 JADE2Q9NQC1 790 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 FBXO3Q9UK99 471 aa23.3■■□□□ 1.32
COL13A1-208ENST00000479733 CSF1RP07333 972 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 HERVK_113P62684 666 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 LCORLQ8N3X6 602 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 OR8K1Q8NGG5 319 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 LUC7L2Q9Y383 392 aaKnown RBP23.29■■□□□ 1.32
COL13A1-208ENST00000479733 DDX60Q8IY21 1712 aaKnown RBP23.29■■□□□ 1.32
COL13A1-208ENST00000479733 TSR1Q2NL82 804 aaKnown RBP23.29■■□□□ 1.32
COL13A1-208ENST00000479733 CT47A1Q5JQC4 288 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-208ENST00000479733 MTRQ99707 1265 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 MACROD2A1Z1Q3 448 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 PDE2AO00408 941 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-208ENST00000479733 TADA2BQ86TJ2 420 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 FAM76AQ8TAV0 307 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 HAUS4Q9H6D7 363 aa23.29■■□□□ 1.32
COL13A1-208ENST00000479733 ZC3H4Q9UPT8 1303 aaKnown RBP23.28■■□□□ 1.32
COL13A1-208ENST00000479733 ANKRD18BA2A2Z9 1011 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 GOLGA6CA6NDK9 693 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms