RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 PAWRQ96IZ0 340 aaKnown RBP27.43■■□□□ 1.98
C9orf3-216ENST00000478603 STRBPQ96SI9 672 aaKnown RBP27.43■■□□□ 1.98
C9orf3-216ENST00000478603 RRP1P56182 461 aaKnown RBP27.42■■□□□ 1.98
C9orf3-216ENST00000478603 OSBP2Q969R2 916 aa27.42■■□□□ 1.98
C9orf3-216ENST00000478603 APBA2Q99767 749 aa27.42■■□□□ 1.98
C9orf3-216ENST00000478603 ARHGEF10LQ9HCE6 1279 aa27.42■■□□□ 1.98
C9orf3-216ENST00000478603 CAPN2P17655 700 aa27.41■■□□□ 1.98
C9orf3-216ENST00000478603 CACNB2Q08289 660 aaPredicted RBP27.41■■□□□ 1.98
C9orf3-216ENST00000478603 MAP2K5Q13163 448 aa27.41■■□□□ 1.98
C9orf3-216ENST00000478603 COG2Q14746 738 aa27.41■■□□□ 1.98
C9orf3-216ENST00000478603 SPICE1Q8N0Z3 855 aa27.41■■□□□ 1.98
C9orf3-216ENST00000478603 CCDC17Q96LX7 622 aa27.41■■□□□ 1.98
C9orf3-216ENST00000478603 PARP14Q460N5 1801 aa27.4■■□□□ 1.98
C9orf3-216ENST00000478603 CHRDL2Q6WN34 429 aa27.4■■□□□ 1.98
C9orf3-216ENST00000478603 TRMT44Q8IYL2 757 aaKnown RBP27.4■■□□□ 1.98
C9orf3-216ENST00000478603 OTUD7AQ8TE49 926 aaPredicted RBP27.4■■□□□ 1.98
C9orf3-216ENST00000478603 APPBP2Q92624 585 aa27.4■■□□□ 1.98
C9orf3-216ENST00000478603 TMX2Q9Y320 296 aa27.4■■□□□ 1.98
C9orf3-216ENST00000478603 A0A0G2JMZ2 1700 aa27.4■■□□□ 1.98
C9orf3-216ENST00000478603 GSG1L2A8MUP6 293 aa27.39■■□□□ 1.98
C9orf3-216ENST00000478603 RNF113AO15541 343 aaKnown RBP27.39■■□□□ 1.98
C9orf3-216ENST00000478603 GLRX3O76003 335 aaKnown RBP27.39■■□□□ 1.98
C9orf3-216ENST00000478603 PTPREP23469 700 aa27.39■■□□□ 1.98
C9orf3-216ENST00000478603 STK11IPQ8N1F8 1099 aa27.39■■□□□ 1.98
C9orf3-216ENST00000478603 VCPKMTQ9H867 229 aa27.39■■□□□ 1.98
C9orf3-216ENST00000478603 HOXC10Q9NYD6 342 aa27.39■■□□□ 1.98
C9orf3-216ENST00000478603 ARPP21Q9UBL0 812 aaPredicted RBP27.39■■□□□ 1.98
C9orf3-216ENST00000478603 TRIOBPQ9H2D6 2365 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 SLC15A5A6NIM6 579 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 CCND3P30281 292 aaPredicted RBP27.38■■□□□ 1.97
C9orf3-216ENST00000478603 ATP2B2Q01814 1243 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 NECAB2Q7Z6G3 386 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 LPAR1Q92633 364 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 FLRT1Q9NZU1 646 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 NR2E3Q9Y5X4 410 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 IVNS1ABPQ9Y6Y0 642 aa27.38■■□□□ 1.97
C9orf3-216ENST00000478603 M0R2C6 588 aa27.37■■□□□ 1.97
C9orf3-216ENST00000478603 EEF2P13639 858 aaKnown RBP27.37■■□□□ 1.97
C9orf3-216ENST00000478603 MNX1P50219 401 aaPredicted RBP27.37■■□□□ 1.97
C9orf3-216ENST00000478603 SAMD1Q6SPF0 538 aaPredicted RBP27.37■■□□□ 1.97
C9orf3-216ENST00000478603 ANKLE1Q8NAG6 615 aa27.37■■□□□ 1.97
C9orf3-216ENST00000478603 MOV10L1Q9BXT6 1211 aaKnown RBP27.37■■□□□ 1.97
C9orf3-216ENST00000478603 SH2D4AQ9H788 454 aa27.37■■□□□ 1.97
C9orf3-216ENST00000478603 GREB1LQ9C091 1923 aaPredicted RBP27.36■■□□□ 1.97
C9orf3-216ENST00000478603 GPAA1O43292 621 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 EVI5O60447 810 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 FLOT1O75955 427 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 DSG3P32926 999 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 GRB14Q14449 540 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 SBK1Q52WX2 424 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 CRBNQ96SW2 442 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 OGDHLQ9ULD0 1010 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 COL11A1P12107 1806 aaPredicted RBP27.36■■□□□ 1.97
C9orf3-216ENST00000478603 TTC41PQ6P2S7 1318 aa27.36■■□□□ 1.97
C9orf3-216ENST00000478603 MINDY4BA8MYZ0 360 aa27.35■■□□□ 1.97
C9orf3-216ENST00000478603 FXR1P51114 621 aaKnown RBP eCLIP27.35■■□□□ 1.97
C9orf3-216ENST00000478603 NPLOC4Q8TAT6 608 aa27.35■■□□□ 1.97
C9orf3-216ENST00000478603 ATG4CQ96DT6 458 aa27.35■■□□□ 1.97
C9orf3-216ENST00000478603 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.35■■□□□ 1.97
C9orf3-216ENST00000478603 SPATC1LQ9H0A9 340 aa27.35■■□□□ 1.97
C9orf3-216ENST00000478603 KANSL2Q9H9L4 492 aa27.35■■□□□ 1.97
C9orf3-216ENST00000478603 EPB41L4AQ9HCS5 686 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-216ENST00000478603 ZFYP08048 801 aaPredicted RBP27.34■■□□□ 1.97
C9orf3-216ENST00000478603 FRMPD3Q5JV73 1810 aa27.34■■□□□ 1.97
C9orf3-216ENST00000478603 WDR46O15213 610 aaKnown RBP27.33■■□□□ 1.97
C9orf3-216ENST00000478603 PLS1Q14651 629 aa27.33■■□□□ 1.97
C9orf3-216ENST00000478603 GIMAP6Q6P9H5 292 aa27.33■■□□□ 1.97
C9orf3-216ENST00000478603 SEC62Q99442 399 aaKnown RBP27.33■■□□□ 1.97
C9orf3-216ENST00000478603 NBPF3Q9H094 633 aa27.33■■□□□ 1.97
C9orf3-216ENST00000478603 RBM27Q9P2N5 1060 aaKnown RBP27.33■■□□□ 1.97
C9orf3-216ENST00000478603 ERC2O15083 957 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 RAD21O60216 631 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 ERCC3P19447 782 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 RASA1P20936 1047 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 MFSD14CQ5VZR4 134 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 LHX8Q68G74 356 aa27.32■■□□□ 1.96
C9orf3-216ENST00000478603 APPP05067 770 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 HOXC6P09630 235 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 TDO2P48775 406 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 MB21D1Q8N884 522 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 YTHDC1Q96MU7 727 aaKnown RBP27.31■■□□□ 1.96
C9orf3-216ENST00000478603 C11orf49Q9H6J7 331 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 MKNK2Q9HBH9 465 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 FBXO28Q9NVF7 368 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 ZNF236Q9UL36 1845 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 ROBO3Q96MS0 1386 aa27.31■■□□□ 1.96
C9orf3-216ENST00000478603 ZNFX1Q9P2E3 1918 aaKnown RBP27.31■■□□□ 1.96
C9orf3-216ENST00000478603 MX1P20591 662 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 ADORA2AP29274 412 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 DPP9Q86TI2 863 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 SHCBP1Q8NEM2 672 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 FSD1Q9BTV5 496 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 GOPCQ9HD26 462 aa27.3■■□□□ 1.96
C9orf3-216ENST00000478603 MYH4Q9Y623 1939 aa27.29■■□□□ 1.96
C9orf3-216ENST00000478603 GNAT2P19087 354 aa27.29■■□□□ 1.96
C9orf3-216ENST00000478603 CYP2C19P33261 490 aa27.29■■□□□ 1.96
C9orf3-216ENST00000478603 LRRFIP1Q32MZ4 808 aaKnown RBP27.29■■□□□ 1.96
C9orf3-216ENST00000478603 NCAPG2Q86XI2 1143 aa27.29■■□□□ 1.96
C9orf3-216ENST00000478603 C7orf61Q8IZ16 206 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms