RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 CAGE1Q8TC20 777 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.06□□□□□ -0.64
COL13A1-207ENST00000478219 EME2A4GXA9 379 aaPredicted RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 GOLGA8KD6RF30 607 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 OPLAHO14841 1288 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 IRF6O14896 467 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 N4BP3O15049 544 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 RPSAP08865 295 aaKnown RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 MATR3P43243 847 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 NLRP6P59044 892 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 TBC1D22AQ8WUA7 517 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 ZIM3Q96PE6 472 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 PCDHB6Q9Y5E3 794 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 ECM29Q5VYK3 1845 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 DNM1LO00429 736 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 PPP1R12BO60237 982 aaPredicted RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 MYL6BP14649 208 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 PTPREP23469 700 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 NNTQ13423 1086 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 WDR59Q6PJI9 974 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 RIC3Q7Z5B4 369 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
COL13A1-207ENST00000478219 CCDC51Q96ER9 411 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 MYD88Q99836 296 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 KCNJ14Q9UNX9 436 aa11.05□□□□□ -0.64
COL13A1-207ENST00000478219 TLDC1Q6P9B6 456 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CYB5R4Q7L1T6 521 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 EPSTI1Q96J88 318 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CCT8L2Q96SF2 557 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 PSMB7Q99436 277 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 TACO1Q9BSH4 297 aaKnown RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CSRNP2Q9H175 543 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 TPX2Q9ULW0 747 aaKnown RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CTNND2Q9UQB3 1225 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 PTPRUQ92729 1446 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 ITIH6Q6UXX5 1313 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 UBN2Q6ZU65 1347 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 TTC26A0AVF1 554 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 ACCSLQ4AC99 568 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 UBE3BQ7Z3V4 1068 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 CREG2Q8IUH2 290 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
COL13A1-207ENST00000478219 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 TRIML1Q8N9V2 468 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 MYCBPAPQ8TBZ2 947 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 SCLT1Q96NL6 688 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 EPN3Q9H201 632 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 HAUS2Q9NVX0 235 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 MST1RQ04912 1400 aa11.04□□□□□ -0.64
COL13A1-207ENST00000478219 MYH10P35580 1976 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 MYH13Q9UKX3 1938 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 USP54Q70EL1 1684 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 BACH1O14867 736 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 METAP2P50579 478 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 NR5A1Q13285 461 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 NTRK3Q16288 839 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 CYB5D1Q6P9G0 228 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 C6orf89Q6UWU4 347 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 HAUS4Q9H6D7 363 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 OVOS2A0A0G2JMS6 1433 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 COPB1P53618 953 aaKnown RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 CRYMQ14894 314 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 PTGISQ16647 500 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 NLRP14Q86W24 1093 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 TRIM6Q9C030 488 aaPredicted RBP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 INCENPQ9NQS7 918 aa11.03□□□□□ -0.64
COL13A1-207ENST00000478219 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL13A1-207ENST00000478219 ZSCAN5CA6NGD5 496 aaPredicted RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 OPA1O60313 960 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 IDEP14735 1019 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CXCR5P32302 372 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CYP27A1Q02318 531 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 IMMTQ16891 758 aaKnown RBP11.02□□□□□ -0.65
COL13A1-207ENST00000478219 NOSTRINQ8IVI9 506 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
COL13A1-207ENST00000478219 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms