RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 MAPK4P31152 587 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 ICA1Q05084 483 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 MCMDC2Q4G0Z9 681 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 HTATIP2Q9BUP3 242 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 PAK6Q9NQU5 681 aaPredicted RBP16.85■□□□□ 0.29
PDE6D-204ENST00000477748 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
PDE6D-204ENST00000477748 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 SGPL1O95470 568 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 ERVK-24P63145 666 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
PDE6D-204ENST00000477748 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 TXNRD2Q9NNW7 524 aa16.84■□□□□ 0.29
PDE6D-204ENST00000477748 FARP2O94887 1054 aaPredicted RBP16.83■□□□□ 0.28
PDE6D-204ENST00000477748 SLC3A2P08195 630 aaKnown RBP16.83■□□□□ 0.28
PDE6D-204ENST00000477748 VCAM1P19320 739 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 SDSP20132 328 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 RASA1P20936 1047 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 PDE4AP27815 886 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 ATP2B2Q01814 1243 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
PDE6D-204ENST00000477748 ZNF444Q8N0Y2 327 aaPredicted RBP16.83■□□□□ 0.28
PDE6D-204ENST00000477748 NUDT12Q9BQG2 462 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 SH2D4AQ9H788 454 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 KANSL2Q9H9L4 492 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 RBPJLQ9UBG7 517 aa16.83■□□□□ 0.28
PDE6D-204ENST00000477748 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
PDE6D-204ENST00000477748 CCNA1P78396 465 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 PPARAQ07869 468 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 LBX2Q6XYB7 198 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 CATSPERGQ6ZRH7 1159 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 SIAH1Q8IUQ4 282 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 TRMT44Q8IYL2 757 aaKnown RBP16.82■□□□□ 0.28
PDE6D-204ENST00000477748 DEFB118Q96PH6 123 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
PDE6D-204ENST00000477748 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 TRIOBPQ9H2D6 2365 aa16.82■□□□□ 0.28
PDE6D-204ENST00000477748 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
PDE6D-204ENST00000477748 FOXP2O15409 715 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 PRDM1O75626 825 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
PDE6D-204ENST00000477748 PDE4BQ07343 736 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 PAGR1Q9BTK6 254 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 CRISPLD2Q9H0B8 497 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.283e-6■■□□□ 14.4
PDE6D-204ENST00000477748 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
PDE6D-204ENST00000477748 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
PDE6D-204ENST00000477748 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 HIP1O00291 1037 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 PEX10O60683 326 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
PDE6D-204ENST00000477748 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-204ENST00000477748 DPF3Q92784 378 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDE6D-204ENST00000477748 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 VCPKMTQ9H867 229 aa16.8■□□□□ 0.28
PDE6D-204ENST00000477748 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
PDE6D-204ENST00000477748 HMX1Q9NP08 348 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-204ENST00000477748 MYH4Q9Y623 1939 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 H0YGN5 161 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 RGS2P41220 211 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
PDE6D-204ENST00000477748 ALX1Q15699 326 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
PDE6D-204ENST00000477748 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 ANKLE1Q8NAG6 615 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 TRIB2Q92519 343 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 LPAR1Q92633 364 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 APBA2Q99767 749 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 PORCNQ9H237 461 aa16.79■□□□□ 0.28
PDE6D-204ENST00000477748 RAD21O60216 631 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
PDE6D-204ENST00000477748 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
PDE6D-204ENST00000477748 CYP2B6P20813 491 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 Q3C1V9 767 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 MORN1Q5T089 497 aa16.78■□□□□ 0.28
PDE6D-204ENST00000477748 MAP3K21Q5TCX8 1036 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms