RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-207ENST00000477676 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-207ENST00000477676 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-207ENST00000477676 ST20-MTHFSA0A0A6YYL1 179 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 FYB1O15117 783 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 CYP27B1O15528 508 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 SBF1O95248 1867 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-207ENST00000477676 ADMP35318 185 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 FAM26DQ5JW98 314 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 NCAPG2Q86XI2 1143 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 PUS7Q96PZ0 661 aaKnown RBP6.46□□□□□ -1.38
CKS1B-207ENST00000477676 TERF2IPQ9NYB0 399 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 STIM2Q9P246 746 aa6.46□□□□□ -1.38
CKS1B-207ENST00000477676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-207ENST00000477676 VIRMAQ69YN4 1812 aaKnown RBP6.46□□□□□ -1.38
CKS1B-207ENST00000477676 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-207ENST00000477676 NCAPD2Q15021 1401 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 ZAP70P43403 619 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 AMPHP49418 695 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 SLC7A3Q8WY07 619 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 COG3Q96JB2 828 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 SAP130Q9H0E3 1048 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 ABI2Q9NYB9 513 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-207ENST00000477676 WWC3Q9ULE0 1092 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 CICQ96RK0 1608 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-207ENST00000477676 CCDC88AQ3V6T2 1871 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 C4AP0C0L4 1744 aa6.45□□□□□ -1.38
CKS1B-207ENST00000477676 RTL1A6NKG5 1358 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 USP47Q96K76 1375 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 ARFGEF1Q9Y6D6 1849 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 TIAF1O95411 115 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 SMG8Q8ND04 991 aaKnown RBP6.44□□□□□ -1.38
CKS1B-207ENST00000477676 FBLIM1Q8WUP2 373 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 CXXC1Q9P0U4 656 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-207ENST00000477676 CD2APQ9Y5K6 639 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 INSRP06213 1382 aa6.44□□□□□ -1.38
CKS1B-207ENST00000477676 FAM170BA6NMN3 283 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 FARP2O94887 1054 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-207ENST00000477676 ARL4DP49703 201 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 USP11P51784 963 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 PDE12Q6L8Q7 609 aaKnown RBP6.43□□□□□ -1.38
CKS1B-207ENST00000477676 MPRIPQ6WCQ1 1025 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 ZAR1Q86SH2 424 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 LINC00116Q8NCU8 138 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 ZNF526Q8TF50 670 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-207ENST00000477676 PIGBQ92521 554 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 TBC1D32Q96NH3 1257 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 MKNK1Q9BUB5 465 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 IGSF1Q8N6C5 1336 aa6.43□□□□□ -1.38
CKS1B-207ENST00000477676 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-207ENST00000477676 ATG7O95352 703 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 DRD2P14416 443 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 ITPK1Q13572 414 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 NAA30Q147X3 362 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-207ENST00000477676 OCLNQ16625 522 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 GPR152Q8TDT2 470 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 CCDC97Q96F63 343 aaPredicted RBP6.42□□□□□ -1.38
CKS1B-207ENST00000477676 SUGCTQ9HAC7 445 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 PRKAG2Q9UGJ0 569 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
CKS1B-207ENST00000477676 CGNL1Q0VF96 1302 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 ADAMTS7Q9UKP4 1686 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 FLT4P35916 1363 aa6.42□□□□□ -1.38
CKS1B-207ENST00000477676 PXDNLA1KZ92 1463 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 AFDNP55196 1824 aaKnown RBP6.41□□□□□ -1.38
CKS1B-207ENST00000477676 BIN1O00499 593 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 HSPA6P17066 643 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 ZNF438Q7Z4V0 828 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 RAPGEF4Q8WZA2 1011 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 GATA6Q92908 595 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 ASAP1Q9ULH1 1129 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-207ENST00000477676 PCDH11XQ9BZA7 1347 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 PCDH11YQ9BZA8 1340 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 WDR90Q96KV7 1748 aa6.41□□□□□ -1.38
CKS1B-207ENST00000477676 TJP1Q07157 1748 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 NFKBIEO00221 500 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 DLGAP3O95886 979 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 ACPPP15309 386 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 PKN1Q16512 942 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 ZNF792Q3KQV3 632 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 DNAJC5GQ8N7S2 189 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 CLP1Q92989 425 aaKnown RBP6.4□□□□□ -1.38
CKS1B-207ENST00000477676 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 TIMELESSQ9UNS1 1208 aa6.4□□□□□ -1.38
CKS1B-207ENST00000477676 KDRP35968 1356 aa6.4□□□□□ -1.39
CKS1B-207ENST00000477676 TONSLQ96HA7 1378 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms