RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SPP2Q13103 211 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
SEC13-215ENST00000477547 LRRC47Q8N1G4 583 aaKnown RBP18.01■□□□□ 0.47
SEC13-215ENST00000477547 ACER1Q8TDN7 264 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 UPF3BQ9BZI7 483 aaKnown RBP18.01■□□□□ 0.47
SEC13-215ENST00000477547 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 NYAP2Q9P242 653 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 AFG3L2Q9Y4W6 797 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 WDR19Q8NEZ3 1342 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 ERICH2A1L162 156 aa18■□□□□ 0.47
SEC13-215ENST00000477547 IFIT3O14879 490 aaKnown RBP18■□□□□ 0.47
SEC13-215ENST00000477547 TBC1D8O95759 1140 aa18■□□□□ 0.47
SEC13-215ENST00000477547 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
SEC13-215ENST00000477547 DHX32Q7L7V1 743 aaKnown RBP18■□□□□ 0.47
SEC13-215ENST00000477547 ENAHQ8N8S7 591 aaPredicted RBP18■□□□□ 0.47
SEC13-215ENST00000477547 ZNF296Q8WUU4 475 aaPredicted RBP18■□□□□ 0.47
SEC13-215ENST00000477547 IL17RAQ96F46 866 aa18■□□□□ 0.47
SEC13-215ENST00000477547 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
SEC13-215ENST00000477547 KCNH4Q9UQ05 1017 aa18■□□□□ 0.47
SEC13-215ENST00000477547 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 SNAPC2Q13487 334 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 TMEM67Q5HYA8 995 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 RCSD1Q6JBY9 416 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 TMEM87BQ96K49 555 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 LRRC2Q9BYS8 371 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 KIAA1683Q9H0B3 1180 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 MYH6P13533 1939 aa17.99■□□□□ 0.47
SEC13-215ENST00000477547 USP17L10C9JJH3 530 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 TOP1P11387 765 aaKnown RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 HMGCS2P54868 508 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 WTAPQ15007 396 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 SEC23AQ15436 765 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 IFIT1BQ5T764 474 aaKnown RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 MTA3Q9BTC8 594 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 ZSWIM6Q9HCJ5 1215 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 TMX2Q9Y320 296 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 A0A0G2JMZ2 1700 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 COL11A1P12107 1806 aaPredicted RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 A0A0G2JLL6 359 aaPredicted RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 CXCL11O14625 94 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 RAD21O60216 631 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 NOVP48745 357 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 GTF2A2P52657 109 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 USP14P54578 494 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 BACE1P56817 501 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 FGD1P98174 961 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 PRRT2Q7Z6L0 340 aaPredicted RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 DGKHQ86XP1 1220 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 TMEM47Q9BQJ4 181 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 GOPCQ9HD26 462 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
SEC13-215ENST00000477547 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
SEC13-215ENST00000477547 RLFQ13129 1914 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 CCL15-CCL14A0A0B4J2E2 113 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 C19orf81C9J6K1 198 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
SEC13-215ENST00000477547 CCL15Q16663 113 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 GADL1Q6ZQY3 521 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 REM2Q8IYK8 340 aaPredicted RBP17.97■□□□□ 0.47
SEC13-215ENST00000477547 TTC14Q96N46 770 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 VCPKMTQ9H867 229 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 TMOD4Q9NZQ9 345 aa17.97■□□□□ 0.47
SEC13-215ENST00000477547 MANSC4A6NHS7 340 aaPredicted RBP17.96■□□□□ 0.46
SEC13-215ENST00000477547 CETPP11597 493 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 SH3D19Q5HYK7 790 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 HABP4Q5JVS0 413 aaKnown RBP17.96■□□□□ 0.46
SEC13-215ENST00000477547 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 PNMA1Q8ND90 353 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 IGDCC4Q8TDY8 1250 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 C12orf42Q96LP6 360 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 KIF2CQ99661 725 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 SENP2Q9HC62 589 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 MTMR7Q9Y216 660 aa17.96■□□□□ 0.46
SEC13-215ENST00000477547 NDUFB10O96000 172 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 VCAM1P19320 739 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 Q6ZUG5 572 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 RASGRP2Q7LDG7 609 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 SPICE1Q8N0Z3 855 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
SEC13-215ENST00000477547 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 BRI3BPQ8WY22 251 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 ANKS1AQ92625 1134 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 LPAR1Q92633 364 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 MKL1Q969V6 931 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 MS4A4AQ96JQ5 239 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 EMILIN3Q9NT22 766 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 PDRG1Q9NUG6 133 aa17.95■□□□□ 0.46
SEC13-215ENST00000477547 ISY1Q9ULR0 285 aaKnown RBP17.95■□□□□ 0.46
SEC13-215ENST00000477547 MKI67P46013 3256 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms