RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 RUBCNQ92622 972 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 PAGE5Q96GU1 130 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 ZCCHC17Q9NP64 241 aaKnown RBP15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 RWDD2AQ9UIY3 292 aa15.31■□□□□ 0.04
HLA-DMA-208ENST00000477541 MYH8P13535 1937 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 MYH13Q9UKX3 1938 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 TARSL2A2RTX5 802 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 GYPCP04921 128 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 KRT2P35908 639 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 MTF1Q14872 753 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 FANCBQ8NB91 859 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 ABHD10Q9NUJ1 306 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 RBM28Q9NW13 759 aaKnown RBP15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 RREB1Q92766 1687 aa15.3■□□□□ 0.04
HLA-DMA-208ENST00000477541 MYO1CO00159 1063 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 TEX33O43247 280 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CALM1P0DP23 149 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CALM2P0DP24 149 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CALM3P0DP25 149 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 FGFR2P21802 821 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CASP14P31944 242 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 AMPD2Q01433 879 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 GRIN1Q05586 938 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CASP8Q14790 479 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 ZNF827Q17R98 1081 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 SPECC1Q5M775 1068 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 SLC35F6Q8N357 371 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 HAUS4Q9H6D7 363 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 PSMD14O00487 310 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 PRPF3O43395 683 aaKnown RBP15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 SLC5A1P13866 664 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 CKAP4Q07065 602 aaKnown RBP15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 SPATA5Q8NB90 893 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 PNKPQ96T60 521 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 ABCB6Q9NP58 842 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 VPS18Q9P253 973 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 MYO6Q9UM54 1294 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 KCNJ14Q9UNX9 436 aa15.29■□□□□ 0.04
HLA-DMA-208ENST00000477541 A0A1W2PQC6 194 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 GSG1L2A8MUP6 293 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 PDE8AO60658 829 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 MBD4O95243 580 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 GUCY1A2P33402 732 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 FAM89AQ96GI7 184 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 MYL10Q9BUA6 226 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 FAM107BQ9H098 131 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
HLA-DMA-208ENST00000477541 TOGARAM1Q9Y4F4 1720 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 STARD3NLO95772 234 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 ARHGAP25P42331 645 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 COPB1P53618 953 aaKnown RBP15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 MCM6Q14566 821 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 HSP90AA4PQ58FG1 418 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 NLRP10Q86W26 655 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 UBAC1Q9BSL1 405 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 CABP5Q9NP86 173 aa15.27■□□□□ 0.04
HLA-DMA-208ENST00000477541 N4BP3O15049 544 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 MYL1P05976 194 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 PHKA1P46020 1223 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 TDO2P48775 406 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 PAK1Q13153 545 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 NR5A1Q13285 461 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 KRT31Q15323 416 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 IQCEQ6IPM2 695 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 TRAPPC11Q7Z392 1133 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 GRAMD1CQ8IYS0 662 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 ESR2Q92731 530 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 IQCDQ96DY2 449 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 GREM2Q9H772 168 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 H7C1D1 291 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 ZBTB22O15209 634 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 IL2RBP14784 551 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 NT5C2P49902 561 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 VSNL1P62760 191 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 KRT83P78385 493 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 CTDSPL2Q05D32 466 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 ZNF658Q5TYW1 1059 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
HLA-DMA-208ENST00000477541 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms