RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TRIM75PA6NK02 468 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 USP17L10C9JJH3 530 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 APLP1P51693 650 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 PPIL2Q13356 520 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
VHL-203ENST00000477538 APOA5Q6Q788 366 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 CATIPQ7Z7H3 387 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 ZNF654Q8IZM8 581 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 LARP6Q9BRS8 491 aaKnown RBP18.95■□□□□ 0.62
VHL-203ENST00000477538 TSHZ2Q9NRE2 1034 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 SLC12A7Q9Y666 1083 aa18.95■□□□□ 0.62
VHL-203ENST00000477538 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
VHL-203ENST00000477538 MTMR2Q13614 643 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 RGMBQ6NW40 437 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 WNK4Q96J92 1243 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 KIAA1683Q9H0B3 1180 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 GOPCQ9HD26 462 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 NAP1L2Q9ULW6 460 aaPredicted RBP18.94■□□□□ 0.62
VHL-203ENST00000477538 MTMR7Q9Y216 660 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 COL11A1P12107 1806 aaPredicted RBP18.94■□□□□ 0.62
VHL-203ENST00000477538 RLFQ13129 1914 aa18.94■□□□□ 0.62
VHL-203ENST00000477538 IRF6O14896 467 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 RAD21O60216 631 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 GJA5P36382 358 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 ZNF157P51786 506 aaPredicted RBP18.93■□□□□ 0.62
VHL-203ENST00000477538 BACE1P56817 501 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 EVCP57679 992 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 GMCL1P1Q8NEA9 526 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 MYL10Q9BUA6 226 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 CREBZFQ9NS37 354 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 KCNH4Q9UQ05 1017 aa18.93■□□□□ 0.62
VHL-203ENST00000477538 GOLGA8BA8MQT2 603 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 C19orf81C9J6K1 198 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 F5H6K3 240 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 ZBTB43O43298 467 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 DDAH1O94760 285 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 MCM2P49736 904 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 USP14P54578 494 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 KLRC3Q07444 240 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 RAB11FIP4Q86YS3 637 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 RASAL3Q86YV0 1011 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 NUP133Q8WUM0 1156 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 HHIPL1Q96JK4 782 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
VHL-203ENST00000477538 CXCL11O14625 94 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 NDUFB10O96000 172 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 CALM1P0DP23 149 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 CALM2P0DP24 149 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 CALM3P0DP25 149 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 ZBTB48P10074 688 aaPredicted RBP18.91■□□□□ 0.62
VHL-203ENST00000477538 HMGCS2P54868 508 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 TROAPQ12815 778 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 SPRYD7Q5W111 196 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 SLFN13Q68D06 897 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 CHMP4CQ96CF2 233 aa18.91■□□□□ 0.62
VHL-203ENST00000477538 ZNF274Q96GC6 653 aaPredicted RBP18.91■□□□□ 0.62
VHL-203ENST00000477538 SLC10A3P09131 477 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 PDHBP11177 359 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 RXRAP19793 462 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 PDIA3P30101 505 aaKnown RBP18.9■□□□□ 0.62
VHL-203ENST00000477538 RCAN1P53805 252 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
VHL-203ENST00000477538 SH3D19Q5HYK7 790 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 KIAA1755Q5JYT7 1200 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 SPICE1Q8N0Z3 855 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 LPAR1Q92633 364 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 SNX21Q969T3 373 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 C12orf42Q96LP6 360 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
VHL-203ENST00000477538 EMILIN3Q9NT22 766 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 TMOD4Q9NZQ9 345 aa18.9■□□□□ 0.62
VHL-203ENST00000477538 A0A0G2JLL6 359 aaPredicted RBP18.89■□□□□ 0.61
VHL-203ENST00000477538 GOLGA8AA7E2F4 631 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 LARGE1O95461 756 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 SNHG28P0DPA3 235 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 SLC1A4P43007 532 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 METAP2P50579 478 aaKnown RBP eCLIP18.89■□□□□ 0.61
VHL-203ENST00000477538 STK3Q13188 491 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 SNAPC2Q13487 334 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 DGKZQ13574 1117 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 GRM4Q14833 912 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 ME3Q16798 604 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 CCDC96Q2M329 555 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
VHL-203ENST00000477538 PRRT2Q7Z6L0 340 aaPredicted RBP18.89■□□□□ 0.61
VHL-203ENST00000477538 CCDC144CPQ8IYA2 1237 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 CTCFLQ8NI51 663 aaPredicted RBP18.89■□□□□ 0.61
VHL-203ENST00000477538 GMCL1Q96IK5 515 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 MAP3K14Q99558 947 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 HPS5Q9UPZ3 1129 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 NID2Q14112 1375 aa18.89■□□□□ 0.61
VHL-203ENST00000477538 PARP1P09874 1014 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms