RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 RNF141Q8WVD5 230 aa7.27□□□□□ -1.25
UBR3-209ENST00000477461 DCP1AQ9NPI6 582 aaPredicted RBP7.27□□□□□ -1.25
UBR3-209ENST00000477461 MPP2Q14168 576 aa7.26□□□□□ -1.25
UBR3-209ENST00000477461 REC114Q7Z4M0 266 aa7.26□□□□□ -1.25
UBR3-209ENST00000477461 BRMS1Q9HCU9 246 aa7.26□□□□□ -1.25
UBR3-209ENST00000477461 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
UBR3-209ENST00000477461 HPXP02790 462 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 ZGLP1P0C6A0 271 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 ARSHQ5FYA8 562 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 FAM196AQ6ZSG2 479 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 FBXO15Q8NCQ5 510 aaPredicted RBP7.25□□□□□ -1.25
UBR3-209ENST00000477461 RNF32Q9H0A6 362 aa7.25□□□□□ -1.25
UBR3-209ENST00000477461 SLC22A31A6NKX4 558 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 TMEM253P0C7T8 217 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 CFPP27918 469 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 GALK1P51570 392 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 ANKLE2Q86XL3 938 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 BCL2L13Q9BXK5 485 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 EPB41L4BQ9H329 900 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 EBF1Q9UH73 591 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 PCDHB14Q9Y5E9 798 aa7.24□□□□□ -1.25
UBR3-209ENST00000477461 NFIBO00712 420 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 KRT1P04264 644 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 RAG1P15918 1043 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
UBR3-209ENST00000477461 SPOCD1Q6ZMY3 1216 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 CILP2Q8IUL8 1156 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 GIPC2Q8TF65 315 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 KCNN1Q92952 543 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 SYTL4Q96C24 671 aaPredicted RBP7.23□□□□□ -1.25
UBR3-209ENST00000477461 PPP1R16BQ96T49 567 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 SP110Q9HB58 689 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 GGT7Q9UJ14 662 aa7.23□□□□□ -1.25
UBR3-209ENST00000477461 TSPAN15O95858 294 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 POLR2BP30876 1174 aaKnown RBP7.22□□□□□ -1.25
UBR3-209ENST00000477461 MLECQ14165 292 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 CWF19L2Q2TBE0 894 aaKnown RBP7.22□□□□□ -1.25
UBR3-209ENST00000477461 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 ERMP1Q7Z2K6 904 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 LRRC56Q8IYG6 542 aaPredicted RBP7.22□□□□□ -1.25
UBR3-209ENST00000477461 OXR1Q8N573 874 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 BHLHE22Q8NFJ8 381 aaPredicted RBP7.22□□□□□ -1.25
UBR3-209ENST00000477461 ZNF296Q8WUU4 475 aaPredicted RBP7.22□□□□□ -1.25
UBR3-209ENST00000477461 TOX2Q96NM4 488 aa7.22□□□□□ -1.25
UBR3-209ENST00000477461 NPIPB6E9PJ23 425 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 ETV2O00321 342 aaPredicted RBP7.21□□□□□ -1.26
UBR3-209ENST00000477461 RGS13O14921 159 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 UBOX5O94941 541 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 ERCC3P19447 782 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 RPL10P27635 214 aaKnown RBP7.21□□□□□ -1.26
UBR3-209ENST00000477461 CRKP46108 304 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 TEKQ02763 1124 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 SEZ6Q53EL9 994 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 FBLN7Q53RD9 439 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 ATG14Q6ZNE5 492 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 SIRT2Q8IXJ6 389 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 DHX38Q92620 1227 aaKnown RBP7.21□□□□□ -1.26
UBR3-209ENST00000477461 ASPNQ9BXN1 380 aa7.21□□□□□ -1.26
UBR3-209ENST00000477461 ASCC2Q9H1I8 757 aaPredicted RBP7.21□□□□□ -1.26
UBR3-209ENST00000477461 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.26
UBR3-209ENST00000477461 RBM47A0AV96 593 aaKnown RBP7.2□□□□□ -1.26
UBR3-209ENST00000477461 MCM4P33991 863 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 NMIQ13287 307 aaPredicted RBP7.2□□□□□ -1.26
UBR3-209ENST00000477461 GK5Q6ZS86 529 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 TMC3Q7Z5M5 1100 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 ZNF512BQ96KM6 892 aaPredicted RBP7.2□□□□□ -1.26
UBR3-209ENST00000477461 UBP1Q9NZI7 540 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 GPR160Q9UJ42 338 aa7.2□□□□□ -1.26
UBR3-209ENST00000477461 PSPNO60542 156 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 GREM1O60565 184 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 CLCQ05315 142 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 SNW1Q13573 536 aaKnown RBP7.19□□□□□ -1.26
UBR3-209ENST00000477461 ZNF326Q5BKZ1 582 aaKnown RBP7.19□□□□□ -1.26
UBR3-209ENST00000477461 ZNF605Q86T29 641 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 C1QL4Q86Z23 238 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 ANTXR1Q9H6X2 564 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 MINPP1Q9UNW1 487 aa7.19□□□□□ -1.26
UBR3-209ENST00000477461 ZSCAN22P10073 491 aaPredicted RBP7.18□□□□□ -1.26
UBR3-209ENST00000477461 ITGAEP38570 1179 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 OVOS1Q6IE37 1185 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 LCNL1Q6ZST4 164 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 USHBP1Q8N6Y0 703 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 ZSCAN18Q8TBC5 510 aaPredicted RBP7.18□□□□□ -1.26
UBR3-209ENST00000477461 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 ZMYM5Q9UJ78 669 aa7.18□□□□□ -1.26
UBR3-209ENST00000477461 SMG5Q9UPR3 1016 aaKnown RBP7.18□□□□□ -1.26
UBR3-209ENST00000477461 SSU72P8A0A1W2PR75 194 aa7.17□□□□□ -1.26
UBR3-209ENST00000477461 FITM1A5D6W6 292 aa7.17□□□□□ -1.26
UBR3-209ENST00000477461 TCAF2A6NFQ2 919 aa7.17□□□□□ -1.26
UBR3-209ENST00000477461 FKTNO75072 461 aa7.17□□□□□ -1.26
UBR3-209ENST00000477461 PDE6BP35913 854 aa7.17□□□□□ -1.26
UBR3-209ENST00000477461 NBPF12Q5TAG4 269 aaPredicted RBP7.17□□□□□ -1.26
UBR3-209ENST00000477461 TMEM132EQ6IEE7 984 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms