RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 YY1P25490 414 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
PGK1-204ENST00000477335 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 FGD1P98174 961 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 CUL4AQ13619 759 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 SART3Q15020 963 aaKnown RBP10.88□□□□□ -0.67
PGK1-204ENST00000477335 ANKRD1Q15327 319 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 MICU3Q86XE3 530 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 MKL1Q969V6 931 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 HOOK2Q96ED9 719 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 ZNF274Q96GC6 653 aaPredicted RBP10.88□□□□□ -0.67
PGK1-204ENST00000477335 KANSL2Q9H9L4 492 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 NYAP2Q9P242 653 aa10.88□□□□□ -0.67
PGK1-204ENST00000477335 ERICH2A1L162 156 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 CCDC69A6NI79 296 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 ZBTB43O43298 467 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 PPFIA3O75145 1194 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 CELF2O95319 508 aaKnown RBP10.87□□□□□ -0.67
PGK1-204ENST00000477335 TTLL1O95922 423 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 ASNSP08243 561 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 PTPRAP18433 802 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 GJA5P36382 358 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 MCM2P49736 904 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 ATP2B2Q01814 1243 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
PGK1-204ENST00000477335 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 KAT14Q9H8E8 782 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
PGK1-204ENST00000477335 MTMR7Q9Y216 660 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 SLC12A7Q9Y666 1083 aa10.87□□□□□ -0.67
PGK1-204ENST00000477335 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 PPP1R12BO60237 982 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 JAK2O60674 1132 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 DDAH1O94760 285 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 PLEKHA8P1O95397 391 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 NDUFB10O96000 172 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 PDHBP11177 359 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 NF2P35240 595 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 FUT2Q10981 343 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 GRM4Q14833 912 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 CCDC178Q5BJE1 867 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 NBPF11Q86T75 865 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 SPRYD3Q8NCJ5 442 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 CPVLQ9H3G5 476 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 GBA2Q9HCG7 927 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.86□□□□□ -0.67
PGK1-204ENST00000477335 MAD2L2Q9UI95 211 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 TMX2Q9Y320 296 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
PGK1-204ENST00000477335 FRMPD2Q68DX3 1309 aaPredicted RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 IREB2P48200 963 aaKnown RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 METAP2P50579 478 aaKnown RBP eCLIP10.85□□□□□ -0.67
PGK1-204ENST00000477335 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 ZYXQ15942 572 aaKnown RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 NTRK3Q16288 839 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 TTBK2Q6IQ55 1244 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 ARMC9Q7Z3E5 817 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 NSUN7Q8NE18 718 aaKnown RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 IPO9Q96P70 1041 aaKnown RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 WDR18Q9BV38 432 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
PGK1-204ENST00000477335 AFG3L2Q9Y4W6 797 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 ZHX2Q9Y6X8 837 aa10.85□□□□□ -0.67
PGK1-204ENST00000477335 PALM3A6NDB9 673 aaPredicted RBP10.84□□□□□ -0.67
PGK1-204ENST00000477335 SPDYE5A6NIY4 337 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 F5H6K3 240 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 RCAN1P53805 252 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 KLRC3Q07444 240 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 SPP2Q13103 211 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 MTMR2Q13614 643 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 RTN1Q16799 776 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 TMTC3Q6ZXV5 915 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 SPICE1Q8N0Z3 855 aa10.84□□□□□ -0.67
PGK1-204ENST00000477335 SRBD1Q8N5C6 995 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms