RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FOXO4P98177 505 aa17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 NOA1Q8NC60 698 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 CLIC6Q96NY7 704 aa17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 ABCC12Q96J65 1359 aa17.21■□□□□ 0.35
CLSTN1-205ENST00000477264 A0A0G2JLW4 131 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 M0R2C6 588 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 ANTXR2P58335 489 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 CDKAL1Q5VV42 579 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 TRAPPC11Q7Z392 1133 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 CXorf56Q9H5V9 222 aa17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 A1CFQ9NQ94 594 aaKnown RBP17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.34
CLSTN1-205ENST00000477264 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 GNPATO15228 680 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 CDC5LQ99459 802 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 EP400Q96L91 3159 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 CHD4Q14839 1912 aa17.2■□□□□ 0.34
CLSTN1-205ENST00000477264 PSMD14O00487 310 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 PTPREP23469 700 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 MAP2K2P36507 400 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 IQCEQ6IPM2 695 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 WASF1Q92558 559 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 FAM169AQ9Y6X4 670 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 SLC9C2Q5TAH2 1124 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 IQSEC3Q9UPP2 1182 aaPredicted RBP17.19■□□□□ 0.34
CLSTN1-205ENST00000477264 BCORQ6W2J9 1755 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GOLGA6CA6NDK9 693 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GOLGA8KD6RF30 607 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 TEX33O43247 280 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GYPCP04921 128 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GOLGA6DP0CG33 693 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GPATCH11Q8N954 259 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 HAUS4Q9H6D7 363 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 GOLGA6AQ9NYA3 693 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 CEP131Q9UPN4 1083 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 CEP83Q9Y592 693 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 UBN2Q6ZU65 1347 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 FOXN1O15353 648 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 CASP14P31944 242 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 SPAG1Q07617 926 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 ZNF662Q6ZS27 426 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
CLSTN1-205ENST00000477264 ACTN4O43707 911 aaKnown RBP17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 INPP5BP32019 993 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 IRAK1P51617 712 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 SLC27A3Q5K4L6 730 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 B4GALNT4Q76KP1 1039 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 ACRBPQ8NEB7 543 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 MED15Q96RN5 788 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 ABHD10Q9NUJ1 306 aa17.17■□□□□ 0.34
CLSTN1-205ENST00000477264 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 EIF3HO15372 352 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 ZPR1O75312 459 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 HNRNPH1P31943 449 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 CCT5P48643 541 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 MNAT1P51948 309 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 CUL4BQ13620 913 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 SAFBQ15424 915 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 RILPL1Q5EBL4 403 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 KAT2BQ92831 832 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 OSBP2Q969R2 916 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 MYH3P11055 1940 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 NID2Q14112 1375 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 A0A0U1RQJ8 604 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 ZNF213O14771 459 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms