RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 PRKCZQ05513 592 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 ARHGEF6Q15052 776 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 CATSPERGQ6ZRH7 1159 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 ARMC5Q96C12 935 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 IL25Q9H293 177 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 MKNK2Q9HBH9 465 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 RBPJLQ9UBG7 517 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 MORF4L1Q9UBU8 362 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 TMX2Q9Y320 296 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 MYPNQ86TC9 1320 aa14.63□□□□□ -0.07
PRKD3-209ENST00000477132 PLIN4Q96Q06 1357 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L15C9J2P7 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L13C9JLJ4 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L11C9JVI0 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L18D6R9N7 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L22D6RA61 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L17D6RBQ6 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L19D6RCP7 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L20D6RJB6 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 CNMDO75829 334 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
PRKD3-209ENST00000477132 USP17L24Q0WX57 530 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 Q3C1V9 767 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
PRKD3-209ENST00000477132 SKAP1Q86WV1 359 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 SH3TC2Q8TF17 1288 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 KANSL2Q9H9L4 492 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRKD3-209ENST00000477132 BRCA2P51587 3418 aa14.62□□□□□ -0.07
PRKD3-209ENST00000477132 SPDYE16A6NNV3 312 aaPredicted RBP14.61□□□□□ -0.07
PRKD3-209ENST00000477132 TNPO2O14787 897 aaKnown RBP14.61□□□□□ -0.07
PRKD3-209ENST00000477132 FGAP02671 866 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 PRMT2P55345 433 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 ALX1Q15699 326 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 ZNF333Q96JL9 665 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 PAGR1Q9BTK6 254 aa14.61□□□□□ -0.07
PRKD3-209ENST00000477132 FLT3LGP49771 235 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 RGS19P49795 217 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 ERVK-24P63145 666 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 SLC9C1Q4G0N8 1177 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 FAM47AQ5JRC9 791 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 ZNF444Q8N0Y2 327 aaPredicted RBP14.6□□□□□ -0.07
PRKD3-209ENST00000477132 CEP95Q96GE4 821 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 PORCNQ9H237 461 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 BTBD7Q9P203 1132 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 ZMYM6O95789 1325 aa14.6□□□□□ -0.07
PRKD3-209ENST00000477132 POTEFA5A3E0 1075 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 HOXD10P28358 340 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 PDE4BQ07343 736 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 LBX2Q6XYB7 198 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 GPRC5AQ8NFJ5 357 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 NKX2-3Q8TAU0 364 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 RAET1EQ8TD07 263 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 LPAR1Q92633 364 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 TANGO6Q9C0B7 1094 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 SH2D4AQ9H788 454 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
PRKD3-209ENST00000477132 WDR46O15213 610 aaKnown RBP14.58□□□□□ -0.08
PRKD3-209ENST00000477132 MYCP01106 439 aaPredicted RBP14.58□□□□□ -0.08
PRKD3-209ENST00000477132 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.08
PRKD3-209ENST00000477132 HAND2P61296 217 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 TFAP4Q01664 338 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
PRKD3-209ENST00000477132 NUP88Q99567 741 aaPredicted RBP14.58□□□□□ -0.08
PRKD3-209ENST00000477132 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 GJD2Q9UKL4 321 aa14.58□□□□□ -0.08
PRKD3-209ENST00000477132 HIP1O00291 1037 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 NMT2O60551 498 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 NDUFB10O96000 172 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 FGRP09769 529 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 TSPY3P0CV98 308 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 TSPY8P0CW00 308 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 ELNP15502 786 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 GRK4P32298 578 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 IRF5Q13568 498 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 COG2Q14746 738 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 FAM83BQ5T0W9 1011 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 LRRC47Q8N1G4 583 aaKnown RBP14.57□□□□□ -0.08
PRKD3-209ENST00000477132 COA7Q96BR5 231 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 CLIP2Q9UDT6 1046 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
PRKD3-209ENST00000477132 ORC4O43929 436 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms