RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 HDAC1Q13547 482 aaPredicted RBP12.94□□□□□ -0.34
SEC13-214ENST00000476597 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 CLEC10AQ8IUN9 316 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SEC13-214ENST00000476597 LPAR1Q92633 364 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC13-214ENST00000476597 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC13-214ENST00000476597 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 VCPKMTQ9H867 229 aa12.94□□□□□ -0.34
SEC13-214ENST00000476597 HMX1Q9NP08 348 aaPredicted RBP12.94□□□□□ -0.34
SEC13-214ENST00000476597 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
SEC13-214ENST00000476597 SALL3Q9BXA9 1300 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 M0R2C6 588 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
SEC13-214ENST00000476597 EEF2P13639 858 aaKnown RBP12.93□□□□□ -0.34
SEC13-214ENST00000476597 MX1P20591 662 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 RASA1P20936 1047 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 PTPREP23469 700 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 DSG3P32926 999 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 AAMPQ13685 434 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 DPF3Q92784 378 aa12.93□□□□□ -0.34
SEC13-214ENST00000476597 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
SEC13-214ENST00000476597 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 MINDY4BA8MYZ0 360 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 MGAMO43451 1857 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 CCL14Q16627 93 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 SPICE1Q8N0Z3 855 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 SEC62Q99442 399 aaKnown RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 HTATIP2Q9BUP3 242 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 EPB41L4AQ9HCS5 686 aaPredicted RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
SEC13-214ENST00000476597 STAP2Q9UGK3 403 aa12.92□□□□□ -0.34
SEC13-214ENST00000476597 H0YGN5 161 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 WDR46O15213 610 aaKnown RBP12.91□□□□□ -0.34
SEC13-214ENST00000476597 APPP05067 770 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 HOXC6P09630 235 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
SEC13-214ENST00000476597 TDO2P48775 406 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 WDR78Q5VTH9 848 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 SHCBP1Q8NEM2 672 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 APBA2Q99767 749 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 MOV10L1Q9BXT6 1211 aaKnown RBP12.91□□□□□ -0.34
SEC13-214ENST00000476597 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 OGDHLQ9ULD0 1010 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 DOCK3Q8IZD9 2030 aa12.91□□□□□ -0.34
SEC13-214ENST00000476597 STRNO43815 780 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 FLOT1O75955 427 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 PDE1AP54750 535 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 GRB14Q14449 540 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
SEC13-214ENST00000476597 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
SEC13-214ENST00000476597 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 PAWRQ96IZ0 340 aaKnown RBP12.9□□□□□ -0.34
SEC13-214ENST00000476597 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 FLRT1Q9NZU1 646 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 ADAMTS5Q9UNA0 930 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 ROBO3Q96MS0 1386 aa12.9□□□□□ -0.34
SEC13-214ENST00000476597 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 IGHA2P01877 340 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 ERCC3P19447 782 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
SEC13-214ENST00000476597 LHX8Q68G74 356 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 MKL1Q969V6 931 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
SEC13-214ENST00000476597 PRDM1O75626 825 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
SEC13-214ENST00000476597 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 DIS3LQ8TF46 1054 aaKnown RBP12.88□□□□□ -0.35
SEC13-214ENST00000476597 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
SEC13-214ENST00000476597 MROH8Q9H579 483 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
SEC13-214ENST00000476597 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
SEC13-214ENST00000476597 F5H6K3 240 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 SLC25A27O95847 323 aa12.87□□□□□ -0.35
SEC13-214ENST00000476597 ADORA2AP29274 412 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms