RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MKL1Q969V6 931 aa34.86■■■■□ 3.17
HOXB3-208ENST00000476342 NMT2O60551 498 aa34.85■■■■□ 3.17
HOXB3-208ENST00000476342 VCAM1P19320 739 aa34.85■■■■□ 3.17
HOXB3-208ENST00000476342 CRHR2Q13324 411 aa34.85■■■■□ 3.17
HOXB3-208ENST00000476342 TBC1D8O95759 1140 aa34.84■■■■□ 3.17
HOXB3-208ENST00000476342 CTCFP49711 727 aaPredicted RBP34.84■■■■□ 3.17
HOXB3-208ENST00000476342 CCDC178Q5BJE1 867 aa34.84■■■■□ 3.17
HOXB3-208ENST00000476342 TAF6LQ9Y6J9 622 aa34.84■■■■□ 3.17
HOXB3-208ENST00000476342 OSBPP22059 807 aa34.83■■■■□ 3.17
HOXB3-208ENST00000476342 HOXA7P31268 230 aaPredicted RBP34.83■■■■□ 3.17
HOXB3-208ENST00000476342 ZSWIM5Q9P217 1185 aa34.83■■■■□ 3.17
HOXB3-208ENST00000476342 TSKSQ9UJT2 592 aa34.83■■■■□ 3.17
HOXB3-208ENST00000476342 RAD21O60216 631 aa34.82■■■■□ 3.17
HOXB3-208ENST00000476342 ZKSCAN1P17029 563 aaPredicted RBP34.82■■■■□ 3.17
HOXB3-208ENST00000476342 STOX1Q6ZVD7 989 aa34.82■■■■□ 3.17
HOXB3-208ENST00000476342 NOVP48745 357 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 IRX3P78415 501 aaPredicted RBP34.81■■■■□ 3.16
HOXB3-208ENST00000476342 NKX2-3Q8TAU0 364 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 TTC14Q96N46 770 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L15C9J2P7 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L13C9JLJ4 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L11C9JVI0 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L18D6R9N7 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L22D6RA61 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L17D6RBQ6 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L19D6RCP7 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L20D6RJB6 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 USP17L24Q0WX57 530 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 SPICE1Q8N0Z3 855 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 LRRC47Q8N1G4 583 aaKnown RBP34.81■■■■□ 3.16
HOXB3-208ENST00000476342 UBAC1Q9BSL1 405 aa34.81■■■■□ 3.16
HOXB3-208ENST00000476342 WDR46O15213 610 aaKnown RBP34.8■■■■□ 3.16
HOXB3-208ENST00000476342 TLR2O60603 784 aa34.8■■■■□ 3.16
HOXB3-208ENST00000476342 CYP2C8P10632 490 aa34.8■■■■□ 3.16
HOXB3-208ENST00000476342 SMCR8Q8TEV9 937 aaPredicted RBP34.8■■■■□ 3.16
HOXB3-208ENST00000476342 ZKSCAN3Q9BRR0 538 aa34.8■■■■□ 3.16
HOXB3-208ENST00000476342 RPAP3Q9H6T3 665 aaPredicted RBP34.8■■■■□ 3.16
HOXB3-208ENST00000476342 F5H6K3 240 aa34.79■■■■□ 3.16
HOXB3-208ENST00000476342 HSPA8P11142 646 aaKnown RBP34.79■■■■□ 3.16
HOXB3-208ENST00000476342 HSPA4P34932 840 aa34.79■■■■□ 3.16
HOXB3-208ENST00000476342 KLRC3Q07444 240 aa34.79■■■■□ 3.16
HOXB3-208ENST00000476342 GMCL1P1Q8NEA9 526 aa34.79■■■■□ 3.16
HOXB3-208ENST00000476342 ZSCAN10Q96SZ4 725 aaPredicted RBP34.79■■■■□ 3.16
HOXB3-208ENST00000476342 ASCC2Q9H1I8 757 aaPredicted RBP34.79■■■■□ 3.16
HOXB3-208ENST00000476342 KRT32Q14532 448 aa34.78■■■■□ 3.16
HOXB3-208ENST00000476342 TSGA10IPQ3SY00 556 aa34.78■■■■□ 3.16
HOXB3-208ENST00000476342 NOM1Q5C9Z4 860 aaKnown RBP34.78■■■■□ 3.16
HOXB3-208ENST00000476342 KIAA1755Q5JYT7 1200 aa34.78■■■■□ 3.16
HOXB3-208ENST00000476342 DGKHQ86XP1 1220 aa34.78■■■■□ 3.16
HOXB3-208ENST00000476342 TOP1P11387 765 aaKnown RBP34.77■■■■□ 3.16
HOXB3-208ENST00000476342 CATSPERGQ6ZRH7 1159 aa34.77■■■■□ 3.16
HOXB3-208ENST00000476342 TANGO6Q9C0B7 1094 aa34.77■■■■□ 3.16
HOXB3-208ENST00000476342 R3HDMLQ9H3Y0 253 aa34.77■■■■□ 3.16
HOXB3-208ENST00000476342 TNKSO95271 1327 aa34.77■■■■□ 3.16
HOXB3-208ENST00000476342 NDUFB10O96000 172 aa34.76■■■■□ 3.16
HOXB3-208ENST00000476342 MCCP23508 829 aa34.76■■■■□ 3.16
HOXB3-208ENST00000476342 CYB5R4Q7L1T6 521 aa34.76■■■■□ 3.16
HOXB3-208ENST00000476342 USP26Q9BXU7 913 aa34.76■■■■□ 3.16
HOXB3-208ENST00000476342 SART3Q15020 963 aaKnown RBP34.75■■■■□ 3.15
HOXB3-208ENST00000476342 RCSD1Q6JBY9 416 aa34.75■■■■□ 3.15
HOXB3-208ENST00000476342 MB21D2Q8IYB1 491 aaPredicted RBP34.75■■■■□ 3.15
HOXB3-208ENST00000476342 TMEM47Q9BQJ4 181 aa34.75■■■■□ 3.15
HOXB3-208ENST00000476342 GPR25O00155 361 aa34.74■■■■□ 3.15
HOXB3-208ENST00000476342 LBX1P52954 281 aa34.74■■■■□ 3.15
HOXB3-208ENST00000476342 KCNB2Q92953 911 aa34.74■■■■□ 3.15
HOXB3-208ENST00000476342 ADGRA2Q96PE1 1338 aa34.74■■■■□ 3.15
HOXB3-208ENST00000476342 ERICH2A1L162 156 aa34.73■■■■□ 3.15
HOXB3-208ENST00000476342 SLFN13Q68D06 897 aa34.73■■■■□ 3.15
HOXB3-208ENST00000476342 RASEFQ8IZ41 740 aa34.73■■■■□ 3.15
HOXB3-208ENST00000476342 ENAHQ8N8S7 591 aaPredicted RBP34.73■■■■□ 3.15
HOXB3-208ENST00000476342 GTF3C2Q8WUA4 911 aaPredicted RBP34.73■■■■□ 3.15
HOXB3-208ENST00000476342 MCM5P33992 734 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 GCLCP48506 637 aaPredicted RBP34.72■■■■□ 3.15
HOXB3-208ENST00000476342 HERVK_113P62684 666 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 C8orf34Q49A92 452 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 FAM83BQ5T0W9 1011 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 ANKS1AQ92625 1134 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 NEK1Q96PY6 1258 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 P2RX7Q99572 595 aaKnown RBP34.72■■■■□ 3.15
HOXB3-208ENST00000476342 KAT14Q9H8E8 782 aa34.72■■■■□ 3.15
HOXB3-208ENST00000476342 IFIT3O14879 490 aaKnown RBP34.71■■■■□ 3.15
HOXB3-208ENST00000476342 IFIT1BQ5T764 474 aaKnown RBP34.71■■■■□ 3.15
HOXB3-208ENST00000476342 C17orf99Q6UX52 265 aa34.71■■■■□ 3.15
HOXB3-208ENST00000476342 MTA3Q9BTC8 594 aa34.71■■■■□ 3.15
HOXB3-208ENST00000476342 CPA4Q9UI42 421 aa34.71■■■■□ 3.15
HOXB3-208ENST00000476342 FLOT1O75955 427 aa34.7■■■■□ 3.15
HOXB3-208ENST00000476342 SLC1A4P43007 532 aa34.7■■■■□ 3.15
HOXB3-208ENST00000476342 COG2Q14746 738 aa34.7■■■■□ 3.15
HOXB3-208ENST00000476342 GMCL1Q96IK5 515 aa34.7■■■■□ 3.15
HOXB3-208ENST00000476342 SNX14Q9Y5W7 946 aa34.7■■■■□ 3.15
HOXB3-208ENST00000476342 FKTNO75072 461 aa34.69■■■■□ 3.14
HOXB3-208ENST00000476342 BMP3P12645 472 aa34.69■■■■□ 3.14
HOXB3-208ENST00000476342 CHST3Q7LGC8 479 aa34.69■■■■□ 3.14
HOXB3-208ENST00000476342 ZNF296Q8WUU4 475 aaPredicted RBP34.69■■■■□ 3.14
HOXB3-208ENST00000476342 NUP88Q99567 741 aaPredicted RBP34.69■■■■□ 3.14
HOXB3-208ENST00000476342 HOXC10Q9NYD6 342 aa34.69■■■■□ 3.14
HOXB3-208ENST00000476342 PARP14Q460N5 1801 aa34.69■■■■□ 3.14
HOXB3-208ENST00000476342 PRC1O43663 620 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 HMGB1P09429 215 aaKnown RBP34.68■■■■□ 3.14
HOXB3-208ENST00000476342 ANTXR2P58335 489 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms