RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PI4K2BQ8TCG2 481 aa7.82□□□□□ -1.16
PTCD3-211ENST00000476215 CRBNQ96SW2 442 aa7.82□□□□□ -1.16
PTCD3-211ENST00000476215 DPH2Q9BQC3 489 aaPredicted RBP7.82□□□□□ -1.16
PTCD3-211ENST00000476215 SRRTQ9BXP5 876 aaKnown RBP7.82□□□□□ -1.16
PTCD3-211ENST00000476215 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
PTCD3-211ENST00000476215 RNF114Q9Y508 228 aa7.82□□□□□ -1.16
PTCD3-211ENST00000476215 UPK3BL1B0FP48 263 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 UPK3BL2E5RIL1 263 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 FGRP09769 529 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
PTCD3-211ENST00000476215 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
PTCD3-211ENST00000476215 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 HSPA12BQ96MM6 686 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 ANTXR1Q9H6X2 564 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 RC3H2Q9HBD1 1191 aaKnown RBP7.81□□□□□ -1.16
PTCD3-211ENST00000476215 GOLGA2P5Q9HBQ8 144 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 GMIPQ9P107 970 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 STRIP2Q9ULQ0 834 aa7.81□□□□□ -1.16
PTCD3-211ENST00000476215 SLC22A31A6NKX4 558 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 CHURC1-FNTBB4DL54 471 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 BIN1O00499 593 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 DNAJA2O60884 412 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 TNK2Q07912 1038 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 IKZF1Q13422 519 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 SF3A1Q15459 793 aaKnown RBP7.8□□□□□ -1.16
PTCD3-211ENST00000476215 LRRFIP1Q32MZ4 808 aaKnown RBP7.8□□□□□ -1.16
PTCD3-211ENST00000476215 OVOS1Q6IE37 1185 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
PTCD3-211ENST00000476215 SREK1Q8WXA9 508 aaKnown RBP7.8□□□□□ -1.16
PTCD3-211ENST00000476215 CARMIL2Q6F5E8 1435 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 FAM155AB1AL88 458 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-211ENST00000476215 ZP2Q05996 745 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 ARSHQ5FYA8 562 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 ANAPC16Q96DE5 110 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 Q96M66 194 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 PPP1R1BQ9UD71 204 aaPredicted RBP7.79□□□□□ -1.16
PTCD3-211ENST00000476215 MRVI1Q9Y6F6 885 aa7.79□□□□□ -1.16
PTCD3-211ENST00000476215 SRFP11831 508 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 ATP2B1P20020 1258 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 SHDQ96IW2 340 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 ATP13A1Q9HD20 1204 aa7.78□□□□□ -1.16
PTCD3-211ENST00000476215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-211ENST00000476215 MEIS3P2A8K0S8 358 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 RAG1P15918 1043 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 GIPRP48546 466 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 NLRC3Q7RTR2 1065 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 LSRQ86X29 649 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-211ENST00000476215 POU5F2Q8N7G0 328 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 RBBP8NLQ8NC74 664 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-211ENST00000476215 RNF141Q8WVD5 230 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 GPR62Q9BZJ7 368 aa7.77□□□□□ -1.17
PTCD3-211ENST00000476215 CBX7O95931 251 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTCD3-211ENST00000476215 GAB4Q2WGN9 574 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 CDKAL1Q5VV42 579 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 CDCP2Q5VXM1 449 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 RUFY4Q6ZNE9 571 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 TMPRSS7Q7RTY8 843 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 OR6P1Q8NGX9 317 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 DUSP15Q9H1R2 295 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-211ENST00000476215 CNNM2Q9H8M5 875 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 C19orf73Q9NVV2 129 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 CTNND2Q9UQB3 1225 aa7.76□□□□□ -1.17
PTCD3-211ENST00000476215 H3BS24 57 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 NME1P15531 152 aaKnown RBP7.75□□□□□ -1.17
PTCD3-211ENST00000476215 ETFBP38117 255 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 DTWD2Q8NBA8 298 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 VWCEQ96DN2 955 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 DRC1Q96MC2 740 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 KIF2CQ99661 725 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 TM9SF2Q99805 663 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 ZNF408Q9H9D4 720 aa7.75□□□□□ -1.17
PTCD3-211ENST00000476215 CARS2Q9HA77 564 aaKnown RBP7.75□□□□□ -1.17
PTCD3-211ENST00000476215 RBAK-RBAKDNI3L0D1 243 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 STK10O94804 968 aaKnown RBP7.74□□□□□ -1.17
PTCD3-211ENST00000476215 ESR1P03372 595 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 POLR2BP30876 1174 aaKnown RBP7.74□□□□□ -1.17
PTCD3-211ENST00000476215 GBP1P32455 592 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
PTCD3-211ENST00000476215 CCDC74BQ96LY2 380 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 ASPNQ9BXN1 380 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 PRDM7Q9NQW5 492 aa7.74□□□□□ -1.17
PTCD3-211ENST00000476215 FAM86C2PA6NEL3 165 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 GUCY2CP25092 1073 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 PPP2R5EQ16537 467 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 OGFOD2Q6N063 350 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 BAHD1Q8TBE0 780 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-211ENST00000476215 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
PTCD3-211ENST00000476215 TNFRSF10CO14798 259 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 RGS13O14921 159 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 SMAD7O15105 426 aaKnown RBP7.72□□□□□ -1.17
PTCD3-211ENST00000476215 ACRP10323 421 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 GDNFP39905 211 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 CHMP4BP1P59074 171 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms