RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CRBNQ96SW2 442 aa10.51□□□□□ -0.73
SMC5-203ENST00000475540 KRTAP9-2Q9BYQ4 174 aa10.51□□□□□ -0.73
SMC5-203ENST00000475540 TRIT1Q9H3H1 467 aaKnown RBP10.51□□□□□ -0.73
SMC5-203ENST00000475540 RBAK-RBAKDNI3L0D1 243 aa10.5□□□□□ -0.73
SMC5-203ENST00000475540 LRRN2O75325 713 aa10.5□□□□□ -0.73
SMC5-203ENST00000475540 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
SMC5-203ENST00000475540 DTWD2Q8NBA8 298 aa10.5□□□□□ -0.73
SMC5-203ENST00000475540 PI4K2BQ8TCG2 481 aa10.5□□□□□ -0.73
SMC5-203ENST00000475540 ATP13A1Q9HD20 1204 aa10.5□□□□□ -0.73
SMC5-203ENST00000475540 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
SMC5-203ENST00000475540 TNFRSF10CO14798 259 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 SOX9P48436 509 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 RNF4P78317 190 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 ZP2Q05996 745 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
SMC5-203ENST00000475540 VWCEQ96DN2 955 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 GPATCH2Q9NW75 528 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
SMC5-203ENST00000475540 CLEC3AO75596 197 aa10.48□□□□□ -0.73
SMC5-203ENST00000475540 SLC9A7Q96T83 725 aa10.48□□□□□ -0.73
SMC5-203ENST00000475540 TM9SF2Q99805 663 aa10.48□□□□□ -0.73
SMC5-203ENST00000475540 DUSP15Q9H1R2 295 aaPredicted RBP10.48□□□□□ -0.73
SMC5-203ENST00000475540 ADGRE2Q9UHX3 823 aa10.48□□□□□ -0.73
SMC5-203ENST00000475540 VPS37DQ86XT2 251 aa10.47□□□□□ -0.73
SMC5-203ENST00000475540 SEC16BQ96JE7 1060 aa10.47□□□□□ -0.73
SMC5-203ENST00000475540 GPR62Q9BZJ7 368 aa10.47□□□□□ -0.73
SMC5-203ENST00000475540 ASCC2Q9H1I8 757 aaPredicted RBP10.47□□□□□ -0.73
SMC5-203ENST00000475540 KRTAP9-6A0A140TA67 174 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 NASPP49321 788 aaPredicted RBP10.46□□□□□ -0.73
SMC5-203ENST00000475540 EIF6P56537 245 aaKnown RBP10.46□□□□□ -0.73
SMC5-203ENST00000475540 ZNF792Q3KQV3 632 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 NBPF12Q5TAG4 269 aaPredicted RBP10.46□□□□□ -0.73
SMC5-203ENST00000475540 SLC23A3Q6PIS1 610 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 CCDC81Q6ZN84 652 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 TMPRSS7Q7RTY8 843 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 CPLX3Q8WVH0 158 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 DHRS1Q96LJ7 313 aa10.46□□□□□ -0.73
SMC5-203ENST00000475540 SRFP11831 508 aa10.45□□□□□ -0.74
SMC5-203ENST00000475540 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
SMC5-203ENST00000475540 GNL2Q13823 731 aaKnown RBP10.45□□□□□ -0.74
SMC5-203ENST00000475540 TAB3Q8N5C8 712 aaPredicted RBP10.45□□□□□ -0.74
SMC5-203ENST00000475540 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
SMC5-203ENST00000475540 CLEC16AQ2KHT3 1053 aa10.44□□□□□ -0.74
SMC5-203ENST00000475540 TMEM192Q8IY95 271 aa10.44□□□□□ -0.74
SMC5-203ENST00000475540 SLC6A18Q96N87 628 aa10.44□□□□□ -0.74
SMC5-203ENST00000475540 CARS2Q9HA77 564 aaKnown RBP10.44□□□□□ -0.74
SMC5-203ENST00000475540 CAPN10Q9HC96 672 aa10.44□□□□□ -0.74
SMC5-203ENST00000475540 FAM86C2PA6NEL3 165 aa10.43□□□□□ -0.74
SMC5-203ENST00000475540 ACRP10323 421 aa10.43□□□□□ -0.74
SMC5-203ENST00000475540 GUCY2CP25092 1073 aa10.43□□□□□ -0.74
SMC5-203ENST00000475540 CBLL1Q75N03 491 aa10.43□□□□□ -0.74
SMC5-203ENST00000475540 TSPYL5Q86VY4 417 aaPredicted RBP10.43□□□□□ -0.74
SMC5-203ENST00000475540 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
SMC5-203ENST00000475540 WASH4PA8MWX3 477 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 RNASE1P07998 156 aaKnown RBP10.42□□□□□ -0.74
SMC5-203ENST00000475540 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 RUFY4Q6ZNE9 571 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 LSRQ86X29 649 aaPredicted RBP10.42□□□□□ -0.74
SMC5-203ENST00000475540 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 OR6P1Q8NGX9 317 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 ZNF512BQ96KM6 892 aaPredicted RBP10.42□□□□□ -0.74
SMC5-203ENST00000475540 MKRN2Q9H000 416 aaKnown RBP10.42□□□□□ -0.74
SMC5-203ENST00000475540 RC3H2Q9HBD1 1191 aaKnown RBP10.42□□□□□ -0.74
SMC5-203ENST00000475540 PRDM7Q9NQW5 492 aa10.42□□□□□ -0.74
SMC5-203ENST00000475540 TAL1P17542 331 aaPredicted RBP10.41□□□□□ -0.74
SMC5-203ENST00000475540 ATF4P18848 351 aaPredicted RBP10.41□□□□□ -0.74
SMC5-203ENST00000475540 GIPRP48546 466 aa10.41□□□□□ -0.74
SMC5-203ENST00000475540 ENOX1Q8TC92 643 aaKnown RBP10.41□□□□□ -0.74
SMC5-203ENST00000475540 DUSP13Q9UII6 198 aa10.41□□□□□ -0.74
SMC5-203ENST00000475540 ADAMTS6Q9UKP5 1117 aa10.41□□□□□ -0.74
SMC5-203ENST00000475540 UNC5AQ6ZN44 842 aa10.4□□□□□ -0.74
SMC5-203ENST00000475540 SUCOQ9UBS9 1254 aaKnown RBP10.4□□□□□ -0.74
SMC5-203ENST00000475540 STRIP2Q9ULQ0 834 aa10.4□□□□□ -0.74
SMC5-203ENST00000475540 ESR1P03372 595 aa10.39□□□□□ -0.75
SMC5-203ENST00000475540 NMIQ13287 307 aaPredicted RBP10.39□□□□□ -0.75
SMC5-203ENST00000475540 GAB4Q2WGN9 574 aa10.39□□□□□ -0.75
SMC5-203ENST00000475540 IGSF5Q9NSI5 407 aa10.39□□□□□ -0.75
SMC5-203ENST00000475540 SLC12A7Q9Y666 1083 aa10.39□□□□□ -0.75
SMC5-203ENST00000475540 SHISA3A0PJX4 238 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 BIN1O00499 593 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 LTKP29376 864 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 PMS1P54277 932 aaKnown RBP10.38□□□□□ -0.75
SMC5-203ENST00000475540 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 CCDC120Q96HB5 630 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 SHDQ96IW2 340 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 FBXL21Q9UKT6 434 aa10.38□□□□□ -0.75
SMC5-203ENST00000475540 AUHQ13825 339 aaKnown RBP10.37□□□□□ -0.75
SMC5-203ENST00000475540 ZYXQ15942 572 aaKnown RBP10.37□□□□□ -0.75
SMC5-203ENST00000475540 CCDC144CPQ8IYA2 1237 aa10.37□□□□□ -0.75
SMC5-203ENST00000475540 LRRN4CLQ8ND94 238 aa10.37□□□□□ -0.75
SMC5-203ENST00000475540 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
SMC5-203ENST00000475540 PRDM14Q9GZV8 571 aa10.37□□□□□ -0.75
SMC5-203ENST00000475540 EGR3Q06889 387 aa10.36□□□□□ -0.75
SMC5-203ENST00000475540 BBS9Q3SYG4 887 aa10.36□□□□□ -0.75
SMC5-203ENST00000475540 ATG4DQ86TL0 474 aaPredicted RBP10.36□□□□□ -0.75
SMC5-203ENST00000475540 TTC6Q86TZ1 520 aa10.36□□□□□ -0.75
SMC5-203ENST00000475540 DAGLBQ8NCG7 672 aa10.36□□□□□ -0.75
SMC5-203ENST00000475540 SYTL5Q8TDW5 730 aaPredicted RBP10.36□□□□□ -0.75
SMC5-203ENST00000475540 SYTL4Q96C24 671 aaPredicted RBP10.36□□□□□ -0.75
SMC5-203ENST00000475540 ALPK1Q96QP1 1244 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms