RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	DPYD	Q12882	1025 aa		13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CCDC122	Q5T0U0	273 aa		13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CCDC148	Q8NFR7	591 aa		13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GOLGA5	Q8TBA6	731 aa		13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MYO6	Q9UM54	1294 aa		13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MED1	Q15648	1581 aa	Predicted RBP	13.64	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CCDC196	A0A1B0GTZ2	297 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ERVK-24	P63145	666 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CUL4B	Q13620	913 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	EXOC4	Q96A65	974 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TNKS	O95271	1327 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CLGN	O14967	610 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NELFB	Q8WX92	580 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GNL3L	Q9NVN8	582 aa	Known RBP	13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ADD3	Q9UEY8	706 aa	Known RBP	13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GSG1L2	A8MUP6	293 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KRT2	P35908	639 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	UBE3C	Q15386	1083 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PANX2	Q96RD6	677 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	BRMS1	Q9HCU9	246 aa		13.63	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SOS2	Q07890	1332 aa	Predicted RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NAP1L1	P55209	391 aa	Known RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CTSW	P56202	376 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CYP27A1	Q02318	531 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	IFIT1B	Q5T764	474 aa	Known RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CTR9	Q6PD62	1173 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	FBXL16	Q8N461	479 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	RASGRP4	Q8TDF6	673 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ACSBG1	Q96GR2	724 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CTAGE1	Q96RT6	745 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TULP2	O00295	520 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PCCA	P05165	728 aa	Predicted RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ERCC5	P28715	1186 aa	Predicted RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	FAM47A	Q5JRC9	791 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SMARCC1	Q92922	1105 aa	Predicted RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CRACR2A	Q9BSW2	395 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ISCA1	Q9BUE6	129 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	FOXP1	Q9H334	677 aa	Predicted RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CNNM2	Q9H8M5	875 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KCNJ18	B7U540	433 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ZNF185	O15231	689 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NMT2	O60551	498 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TOM1	O60784	492 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	IPO7	O95373	1038 aa	Known RBP	13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	STARD3NL	O95772	234 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KCNJ12	Q14500	433 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ATG3	Q9NT62	314 aa		13.62	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SLC5A1	P13866	664 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	LIFR	P42702	1097 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SARS	P49591	514 aa	Known RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TTC38	Q5R3I4	469 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SGMS1	Q86VZ5	419 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NGLY1	Q96IV0	654 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ABHD10	Q9NUJ1	306 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TTF2	Q9UNY4	1162 aa	Known RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	WTIP	A6NIX2	430 aa	Predicted RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	RNF40	O75150	1001 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TRIM21	P19474	475 aa	Known RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	COPB1	P53618	953 aa	Known RBP	13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CYP26C1	Q6V0L0	522 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CATIP	Q7Z7H3	387 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SRL	Q86TD4	932 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TMTC1	Q8IUR5	882 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TRIM47	Q96LD4	638 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ACBD3	Q9H3P7	528 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	4e-7	■■□□□ 14.2
SKIV2L-208	ENST00000474839	L1RE1	Q9UN81	338 aa		13.61	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ZPR1	O75312	459 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PAK1	Q13153	545 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ENOX2	Q16206	610 aa	Known RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NLRP10	Q86W26	655 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	LUC7L2	Q9Y383	392 aa	Known RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PP2D1	A8MPX8	630 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ATP1A1	P05023	1023 aa	Known RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	VEGFA	P15692	232 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KCNQ4	P56696	695 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	DYNLL1	P63167	89 aa	Known RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PPARA	Q07869	468 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MMS19	Q96T76	1030 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	DUSP10	Q9Y6W6	482 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PPP1R3G	B7ZBB8	358 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	UQCRFS1P1	P0C7P4	283 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	IBSP	P21815	317 aa	Predicted RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PUM3	Q15397	648 aa	Known RBP	13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TRIML1	Q8N9V2	468 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	IQUB	Q8NA54	791 aa		13.6	□□□□□ -0.23
SKIV2L-208	ENST00000474839	POTEB2	H3BUK9	544 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MYO1B	O43795	1136 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	CXCR5	P32302	372 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	EVX2	Q03828	476 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KCTD19	Q17RG1	926 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	RASGRP2	Q7LDG7	609 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ANKRD13C	Q8N6S4	541 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ESR2	Q92731	530 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GBP3	Q9H0R5	595 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TSPYL1	Q9H0U9	437 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms