RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 HSPA9P38646 679 aaKnown RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 RPS6KA3P51812 740 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 FUT2Q10981 343 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 PTGISQ16647 500 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 LARP1BQ659C4 914 aaKnown RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 ARHGAP27Q6ZUM4 889 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 RBM12BQ8IXT5 1001 aaKnown RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 CCDC13Q8IYE1 715 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 OTUD6BQ8N6M0 293 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 ENDOVQ8N8Q3 282 aaKnown RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 MICAL1Q8TDZ2 1067 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 SMARCC1Q92922 1105 aaPredicted RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 CABS1Q96KC9 395 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 ZNF512BQ96KM6 892 aaPredicted RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 BATF3Q9NR55 127 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 COL11A2P13942 1736 aaPredicted RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 A0A087X0B3 334 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 TP73O15350 636 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 ZSCAN12O43309 604 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 AHCYL1O43865 530 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 SMC2O95347 1197 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 CAPNS1P04632 268 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 SLC4A2P04920 1241 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 CCNB1P14635 433 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 MYL5Q02045 173 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 PSMD2Q13200 908 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 DCTN1Q14203 1278 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 NEDD9Q14511 834 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 UAP1Q16222 522 aaPredicted RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 ZMYM1Q5SVZ6 1142 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 NAA35Q5VZE5 725 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 IRGQQ8WZA9 623 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 NUP58Q9BVL2 599 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 ANO2Q9NQ90 1003 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 RBM28Q9NW13 759 aaKnown RBP4.67□□□□□ -1.66
USP16-205ENST00000474835 MAN1B1Q9UKM7 699 aa4.67□□□□□ -1.66
USP16-205ENST00000474835 A0A1W2PQC6 194 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 TTC36A6NLP5 189 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 KIF3BO15066 747 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 CYP27B1O15528 508 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 TRIM37O94972 964 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ZNF202O95125 648 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 FAM107AO95990 144 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 FBLN1P23142 703 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 MAP2K2P36507 400 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 GGCXP38435 758 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 RCAN1P53805 252 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 HAUS3Q68CZ6 603 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 OR52E8Q6IFG1 317 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ATXN2LQ8WWM7 1075 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 UBXN4Q92575 508 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 JAKMIP1Q96N16 626 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 TLR7Q9NYK1 1049 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 EURLQ9NYK6 297 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 A0A0G2JMZ2 1700 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 LRRC37A2A6NM11 1700 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 AFF2P51816 1311 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 PDS5AQ29RF7 1337 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 DOCK1Q14185 1865 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ERICH2A1L162 156 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 F6X3S4 739 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 TULP1O00294 542 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 RTN3O95197 1032 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 NPTXRO95502 500 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 PENKP01210 267 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 PECAM1P16284 738 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 MAGEA8P43361 318 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 MYSM1Q5VVJ2 828 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 LRIG3Q6UXM1 1119 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 NCAPG2Q86XI2 1143 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ALDH16A1Q8IZ83 802 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 C4orf32Q8N8J7 132 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 DRC1Q96MC2 740 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 TMEM109Q9BVC6 243 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 EPB41L4AQ9HCS5 686 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 SLC40A1Q9NP59 571 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 DDX43Q9NXZ2 648 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 TPX2Q9ULW0 747 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 SRCAPQ6ZRS2 3230 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 A0A0G2JLW4 131 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 GOLGA8KD6RF30 607 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ZSCAN9O15535 394 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 IGKV5-2P06315 115 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 GCLCP48506 637 aaPredicted RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 FXR1P51114 621 aaKnown RBP eCLIP4.66□□□□□ -1.66
USP16-205ENST00000474835 LBRQ14739 615 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 GLE1Q53GS7 698 aaKnown RBP4.66□□□□□ -1.66
USP16-205ENST00000474835 MYCBPAPQ8TBZ2 947 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 ABHD10Q9NUJ1 306 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 STAG3Q9UJ98 1225 aa4.66□□□□□ -1.66
USP16-205ENST00000474835 TMEM2Q9UHN6 1383 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 MYO1FO00160 1098 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 ERLIN2O94905 339 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 FGRP09769 529 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 DRD4P21917 467 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 SFPQP23246 707 aaKnown RBP eCLIP4.65□□□□□ -1.66
USP16-205ENST00000474835 PLCD1P51178 756 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 ELF3P78545 371 aaPredicted RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms