RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 HPS5Q9UPZ3 1129 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 BAZ2BQ9UIF8 2168 aaKnown RBP24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 ERICH2A1L162 156 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 CCDC144CPQ8IYA2 1237 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 TAF1DQ9H5J8 278 aaPredicted RBP24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 MTMR6Q9Y217 621 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 PPFIA3O75145 1194 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 POTEIP0CG38 1075 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 POTEJP0CG39 1038 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 SART3Q15020 963 aaKnown RBP24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 CERKLQ49MI3 558 aaPredicted RBP24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 DNTTIP2Q5QJE6 756 aaKnown RBP24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 SGMS1Q86VZ5 419 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 CHMP4CQ96CF2 233 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 CEP95Q96GE4 821 aa24.07■■□□□ 1.44
SMIM11A-204ENST00000474455 MPHOSPH10O00566 681 aaKnown RBP24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 EAPPQ56P03 285 aaPredicted RBP24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 IFIT1BQ5T764 474 aaKnown RBP24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 APOA5Q6Q788 366 aa24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 APOBEC3FQ8IUX4 373 aaKnown RBP24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 ZNF274Q96GC6 653 aaPredicted RBP24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 ATAD5Q96QE3 1844 aa24.06■■□□□ 1.44
SMIM11A-204ENST00000474455 GJB2P29033 226 aa24.05■■□□□ 1.44
SMIM11A-204ENST00000474455 CCDC69A6NI79 296 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 GOLGA8BA8MQT2 603 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 ADM5C9JUS6 153 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 PFKFB2O60825 505 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 USP50Q70EL3 339 aaPredicted RBP24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 MICU3Q86XE3 530 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 MTA3Q9BTC8 594 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 RRAGCQ9HB90 399 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 TCP11L1Q9NUJ3 509 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 HERC5Q9UII4 1024 aaKnown RBP24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 FIBPO43427 364 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 GTF3C6Q969F1 213 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 STX8Q9UNK0 236 aa24.04■■□□□ 1.44
SMIM11A-204ENST00000474455 GOLGA6L6A8MZA4 724 aa24.03■■□□□ 1.44
SMIM11A-204ENST00000474455 ZNF526Q8TF50 670 aaPredicted RBP24.03■■□□□ 1.44
SMIM11A-204ENST00000474455 SLC12A7Q9Y666 1083 aa24.03■■□□□ 1.44
SMIM11A-204ENST00000474455 ELP1O95163 1332 aa24.03■■□□□ 1.44
SMIM11A-204ENST00000474455 IGKV6D-41A0A0C4DH26 115 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 CCDC192P0DO97 292 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 CDC27P30260 824 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 GUCY1A2P33402 732 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 ZNF654Q8IZM8 581 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 TBC1D12O60347 775 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 PDCP20941 246 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 ADD1P35611 737 aaKnown RBP24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 MAP3K10Q02779 954 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 SEPT2Q15019 361 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 RASGRP2Q7LDG7 609 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 DCPSQ96C86 337 aaKnown RBP24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 TMEM47Q9BQJ4 181 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 FAM217BQ9NTX9 383 aaPredicted RBP24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 PLIN4Q96Q06 1357 aa24.02■■□□□ 1.44
SMIM11A-204ENST00000474455 IQCA1LA6NCM1 817 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 ZBTB43O43298 467 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 CTDNEP1O95476 244 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 GH2P01242 217 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 SMAP1Q8IYB5 467 aaPredicted RBP24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 NUP133Q8WUM0 1156 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 MTMR4Q9NYA4 1195 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 MTMR7Q9Y216 660 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 PITPNM2Q9BZ72 1349 aa24.01■■□□□ 1.43
SMIM11A-204ENST00000474455 PHF20L1A8MW92 1017 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 ABCB5Q2M3G0 1257 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 DGKHQ86XP1 1220 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 TMTC2Q8N394 836 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 SSC5DA1L4H1 1573 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 JAK2O60674 1132 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 DNM1Q05193 864 aaKnown RBP24■■□□□ 1.43
SMIM11A-204ENST00000474455 ANKS1AQ92625 1134 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 CCDC17Q96LX7 622 aa24■■□□□ 1.43
SMIM11A-204ENST00000474455 METAP2P50579 478 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 TROAPQ12815 778 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 PRKG1Q13976 671 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 KRT26Q7Z3Y9 468 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 SIAH1Q8IUQ4 282 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 CCDC94Q9BW85 323 aaPredicted RBP23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 NMRK2Q9NPI5 230 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 CLIP2Q9UDT6 1046 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 MYH6P13533 1939 aa23.99■■□□□ 1.43
SMIM11A-204ENST00000474455 NOVP48745 357 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 KRT85P78386 507 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 ATP2B2Q01814 1243 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 CCDC84Q86UT8 332 aaPredicted RBP23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 CMTR1Q8N1G2 835 aaKnown RBP23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 TTC12Q9H892 705 aaPredicted RBP23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 NT5C2P49902 561 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 SULF1Q8IWU6 871 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 LRRC47Q8N1G4 583 aaKnown RBP23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 PNMA1Q8ND90 353 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 GLIS2Q9BZE0 524 aaPredicted RBP23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 KAT14Q9H8E8 782 aa23.98■■□□□ 1.43
SMIM11A-204ENST00000474455 GOLGA8AA7E2F4 631 aa23.97■■□□□ 1.43
SMIM11A-204ENST00000474455 CATIPQ7Z7H3 387 aa23.97■■□□□ 1.43
SMIM11A-204ENST00000474455 KIAA1524Q8TCG1 905 aa23.97■■□□□ 1.43
SMIM11A-204ENST00000474455 ZNF830Q96NB3 372 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms