RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 TEPSINQ96N21 525 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 MAP3K14Q99558 947 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 ZDHHC9Q9Y397 364 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 PPP2R3BQ9Y5P8 575 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 BRD1O95696 1058 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 TOP1P11387 765 aaKnown RBP23.73■■□□□ 1.39
CDHR3-210ENST00000474330 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 LARP1BQ659C4 914 aaKnown RBP23.73■■□□□ 1.39
CDHR3-210ENST00000474330 CDAN1Q8IWY9 1227 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 FAM184AQ8NB25 1140 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 DDX11Q96FC9 970 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 RBM28Q9NW13 759 aaKnown RBP23.73■■□□□ 1.39
CDHR3-210ENST00000474330 KIF3AQ9Y496 699 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
CDHR3-210ENST00000474330 STX6O43752 255 aa23.72■■□□□ 1.39
CDHR3-210ENST00000474330 HHIPL1Q96JK4 782 aa23.72■■□□□ 1.39
CDHR3-210ENST00000474330 GBA2Q9HCG7 927 aaPredicted RBP23.72■■□□□ 1.39
CDHR3-210ENST00000474330 FDPSP14324 419 aaKnown RBP23.71■■□□□ 1.39
CDHR3-210ENST00000474330 IFNAR1P17181 557 aa23.71■■□□□ 1.39
CDHR3-210ENST00000474330 CAPNS2Q96L46 248 aa23.71■■□□□ 1.39
CDHR3-210ENST00000474330 TTLL1O95922 423 aa23.7■■□□□ 1.39
CDHR3-210ENST00000474330 ABCB5Q2M3G0 1257 aa23.7■■□□□ 1.39
CDHR3-210ENST00000474330 TMEM179Q6ZVK1 233 aa23.7■■□□□ 1.39
CDHR3-210ENST00000474330 CTCFLQ8NI51 663 aaPredicted RBP23.7■■□□□ 1.39
CDHR3-210ENST00000474330 TNPO1Q92973 898 aaKnown RBP23.7■■□□□ 1.39
CDHR3-210ENST00000474330 C2orf69Q8N8R5 385 aa23.7■■□□□ 1.38
CDHR3-210ENST00000474330 KANSL2Q9H9L4 492 aa23.7■■□□□ 1.38
CDHR3-210ENST00000474330 ORC3Q9UBD5 711 aaPredicted RBP23.7■■□□□ 1.38
CDHR3-210ENST00000474330 MYH4Q9Y623 1939 aa23.69■■□□□ 1.38
CDHR3-210ENST00000474330 KIF5BP33176 963 aa23.69■■□□□ 1.38
CDHR3-210ENST00000474330 HUNKP57058 714 aa23.69■■□□□ 1.38
CDHR3-210ENST00000474330 RRP1BQ14684 758 aaKnown RBP23.69■■□□□ 1.38
CDHR3-210ENST00000474330 STK36Q9NRP7 1315 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 THSD7BQ9C0I4 1608 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 GRM4Q14833 912 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 CABP5Q9NP86 173 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 NYAP2Q9P242 653 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 MTMR6Q9Y217 621 aa23.68■■□□□ 1.38
CDHR3-210ENST00000474330 PPFIA3O75145 1194 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 GDF11O95390 407 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 HSPA1AP0DMV8 641 aaKnown RBP23.67■■□□□ 1.38
CDHR3-210ENST00000474330 HSPA1BP0DMV9 641 aaKnown RBP23.67■■□□□ 1.38
CDHR3-210ENST00000474330 GUCY1A2P33402 732 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 MIGA2Q7L4E1 593 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 NBPF11Q86T75 865 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 HOOK2Q96ED9 719 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 CLIP2Q9UDT6 1046 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 ATAD5Q96QE3 1844 aa23.67■■□□□ 1.38
CDHR3-210ENST00000474330 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 ZSCAN22P10073 491 aaPredicted RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 ECE1P42892 770 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 SSRP1Q08945 709 aaKnown RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 SEPT2Q15019 361 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 PAXIP1Q6ZW49 1069 aaPredicted RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 TMTC3Q6ZXV5 915 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 MOB2Q70IA6 237 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 CLEC10AQ8IUN9 316 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 PHKBQ93100 1093 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 MKL1Q969V6 931 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 AOC2O75106 756 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 GH2P01242 217 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 JAG1P78504 1218 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 FUT2Q10981 343 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 GRM1Q13255 1194 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 NBPF12Q5TAG4 269 aaPredicted RBP23.66■■□□□ 1.38
CDHR3-210ENST00000474330 RGS22Q8NE09 1264 aa23.66■■□□□ 1.38
CDHR3-210ENST00000474330 MYH6P13533 1939 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 PAPPA2Q9BXP8 1791 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 GNAQP50148 359 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 CLEC17AQ6ZS10 378 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 TRIM22Q8IYM9 498 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 SLC26A6Q9BXS9 759 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 RNF26Q9BY78 433 aaPredicted RBP23.65■■□□□ 1.38
CDHR3-210ENST00000474330 MAD2L2Q9UI95 211 aa23.65■■□□□ 1.38
CDHR3-210ENST00000474330 VPS37CA5D8V6 355 aaPredicted RBP23.64■■□□□ 1.38
CDHR3-210ENST00000474330 FAM155AB1AL88 458 aaPredicted RBP23.64■■□□□ 1.38
CDHR3-210ENST00000474330 PLEKHA8P1O95397 391 aa23.64■■□□□ 1.38
CDHR3-210ENST00000474330 EEF2P13639 858 aaKnown RBP23.64■■□□□ 1.38
CDHR3-210ENST00000474330 CAP2P40123 477 aa23.64■■□□□ 1.38
CDHR3-210ENST00000474330 SIAH1Q8IUQ4 282 aa23.64■■□□□ 1.38
CDHR3-210ENST00000474330 CMTR1Q8N1G2 835 aaKnown RBP23.64■■□□□ 1.38
CDHR3-210ENST00000474330 WBP1LQ9NX94 342 aa23.64■■□□□ 1.38
CDHR3-210ENST00000474330 PALM3A6NDB9 673 aaPredicted RBP23.63■■□□□ 1.37
CDHR3-210ENST00000474330 PHF20L1A8MW92 1017 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 FKBP1BP68106 108 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 ICA1Q05084 483 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 SUPT20HL1Q3ZLR7 823 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 DCAF15Q66K64 600 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 RGMBQ6NW40 437 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 LRRC47Q8N1G4 583 aaKnown RBP23.63■■□□□ 1.37
CDHR3-210ENST00000474330 CCDC82Q8N4S0 544 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 SRBD1Q8N5C6 995 aaKnown RBP23.63■■□□□ 1.37
CDHR3-210ENST00000474330 SSC5DA1L4H1 1573 aa23.63■■□□□ 1.37
CDHR3-210ENST00000474330 H3BQV1 296 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 F13A1P00488 732 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 SNHG28P0DPA3 235 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 IFFO2Q5TF58 517 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 FOXD4L5Q5VV16 416 aaPredicted RBP23.62■■□□□ 1.37
CDHR3-210ENST00000474330 FOXD4L4Q8WXT5 416 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms