RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GBP6Q6ZN66 633 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 JAKMIP2Q96AA8 810 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 PAGE5Q96GU1 130 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 SH3GL2Q99962 352 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 CCDC196A0A1B0GTZ2 297 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 LRRC10BA6NIK2 292 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 AENQ8WTP8 325 aaKnown RBP20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 FOXP1Q9H334 677 aaPredicted RBP20.95■□□□□ 0.94
ECHDC1-214ENST00000474289 ZAP70P43403 619 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 PI16Q6UXB8 463 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 SGMS1Q86VZ5 419 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 EPSTI1Q96J88 318 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 TMEM87BQ96K49 555 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 NLRP2Q9NX02 1062 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 TAB2Q9NYJ8 693 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 DONSONQ9NYP3 566 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 FAM184BQ9ULE4 1060 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 PDE2AO00408 941 aaPredicted RBP20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 COPB1P53618 953 aaKnown RBP20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 HERVK_113P62684 666 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 CCDC122Q5T0U0 273 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 GSDMAQ96QA5 445 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 HINFPQ9BQA5 517 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 CAPN7Q9Y6W3 813 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 MYH7P12883 1935 aa20.94■□□□□ 0.94
ECHDC1-214ENST00000474289 ZNF185O15231 689 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 CAGE1Q8TC20 777 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 LAMB4A4D0S4 1761 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 PLBD2Q8NHP8 589 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 WASF1Q92558 559 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 XAGE2Q96GT9 111 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 CEP131Q9UPN4 1083 aa20.93■□□□□ 0.94
ECHDC1-214ENST00000474289 IFNAR1P17181 557 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 RRP36Q96EU6 259 aaKnown RBP20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 LMTK3Q96Q04 1460 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 CIAO1O76071 339 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 FNTAP49354 379 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 C2orf54Q08AI8 447 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 SND1Q7KZF4 910 aaKnown RBP eCLIP20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 ANKRD18AQ8IVF6 992 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 AATFQ9NY61 560 aaKnown RBP eCLIP20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 CEP126Q9P2H0 1117 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 SLC12A7Q9Y666 1083 aa20.92■□□□□ 0.94
ECHDC1-214ENST00000474289 GOLGA8KD6RF30 607 aa20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 MYO1FO00160 1098 aa20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 OXER1Q8TDS5 423 aa20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 CABS1Q96KC9 395 aa20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 PARP4Q9UKK3 1724 aaKnown RBP20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 ATXN2Q99700 1313 aaKnown RBP20.91■□□□□ 0.94
ECHDC1-214ENST00000474289 TTC26A0AVF1 554 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 TCP11X2Q5H9J9 407 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 JPH2Q9BR39 696 aaPredicted RBP20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 CABP5Q9NP86 173 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 INCENPQ9NQS7 918 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 SUFUQ9UMX1 484 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 TTF1Q15361 905 aaPredicted RBP20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 SYMPKQ92797 1274 aaKnown RBP20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 TBC1D2BQ9UPU7 963 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 MEGF6O75095 1541 aa20.9■□□□□ 0.94
ECHDC1-214ENST00000474289 NDUFAB1O14561 156 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 APPP05067 770 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 UBXN1Q04323 297 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 AEBP2Q6ZN18 517 aaPredicted RBP20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 OR8K1Q8NGG5 319 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 STAMQ92783 540 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 FER1L4A9Z1Z3 1794 aa20.89■□□□□ 0.94
ECHDC1-214ENST00000474289 KCNJ18B7U540 433 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 A1BGP04217 495 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 SPAG1Q07617 926 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 KCNJ12Q14500 433 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 TTLL7Q6ZT98 887 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 AMOTL1Q8IY63 956 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 CCDC82Q8N4S0 544 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 EHBP1Q8NDI1 1231 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 AIDAQ96BJ3 306 aa20.89■□□□□ 0.93
ECHDC1-214ENST00000474289 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 H0YHG0 523 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 SKOR1P84550 965 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 SETQ01105 290 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 TTMPQ5BVD1 217 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 WDR59Q6PJI9 974 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 HDAC7Q8WUI4 952 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 DNAJC7Q99615 494 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 A1CFQ9NQ94 594 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 CWC25Q9NXE8 425 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 KIF1CO43896 1103 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 FSBPO95073 299 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 GPTP24298 496 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 LIFRP42702 1097 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 PDCLQ13371 301 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 B4GALNT4Q76KP1 1039 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms