RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ADH6P28332 368 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TPM4P67936 248 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 ICA1Q05084 483 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 BMS1Q14692 1282 aaKnown RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 C1QTNF12Q5T7M4 302 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 MMS22LQ6ZRQ5 1243 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 GAS2L3Q86XJ1 694 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 KIF18AQ8NI77 898 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 SYAP1Q96A49 352 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 UBA5Q9GZZ9 404 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 RANBP17Q9H2T7 1088 aaKnown RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 LIN7BQ9HAP6 207 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 ETAA1Q9NY74 926 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 RCAN3Q9UKA8 241 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 SYNPO2Q9UMS6 1093 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 CGNL1Q0VF96 1302 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TRPM2O94759 1503 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 LMTK2Q8IWU2 1503 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 NEURL1BA8MQ27 555 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 SCAMP3O14828 347 aaKnown RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 GHRHP01286 108 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 SCP2P22307 547 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 PAX7P23759 505 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 ABCD1P33897 745 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 PCSK7Q16549 785 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 MAP9Q49MG5 647 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 EFCAB13Q8IY85 973 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 SLC16A10Q8TF71 515 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 TNPO1Q92973 898 aaKnown RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 KIF1BPQ96EK5 621 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 CAMKK2Q96RR4 588 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 UTP14AQ9BVJ6 771 aaKnown RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 CHCHD3Q9NX63 227 aaKnown RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 PSD3Q9NYI0 1048 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-209ENST00000474157 SLC6A14Q9UN76 642 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 TRAK1Q9UPV9 953 aa8.5□□□□□ -1.05
GPNMB-209ENST00000474157 SLIT2O94813 1529 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 PES1O00541 588 aaKnown RBP8.49□□□□□ -1.05
GPNMB-209ENST00000474157 CPB1P15086 417 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 ADH7P40394 386 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 ATP11AP98196 1134 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 NFX1Q12986 1120 aaKnown RBP8.49□□□□□ -1.05
GPNMB-209ENST00000474157 TMED1Q13445 227 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 FILIP1LQ4L180 1135 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 PRPF40BQ6NWY9 871 aaKnown RBP8.49□□□□□ -1.05
GPNMB-209ENST00000474157 FAM35AQ86V20 835 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 FCHSD1Q86WN1 690 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 ZNF397Q8NF99 534 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-209ENST00000474157 ZBTB9Q96C00 473 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 TCF12Q99081 682 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 IL16Q14005 1332 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 SYNRGQ9UMZ2 1314 aa8.49□□□□□ -1.05
GPNMB-209ENST00000474157 GLI3P10071 1580 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 DISP2A7MBM2 1401 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 POLD1P28340 1107 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 FCGRTP55899 365 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 ZRSR1Q15695 479 aaKnown RBP8.48□□□□□ -1.05
GPNMB-209ENST00000474157 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 KLHL10Q6JEL2 608 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 CCNJLQ8IV13 435 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 CXorf38Q8TB03 319 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 GOLGA5Q8TBA6 731 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 TCP11Q8WWU5 503 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 IRF7Q92985 503 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 RBSNQ9H1K0 784 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 USP19O94966 1318 aa8.48□□□□□ -1.05
GPNMB-209ENST00000474157 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 GOLGA6BA6NDN3 693 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 ADARB2-AS1A8MUL3 147 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 NFKBIEO00221 500 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 APBA3O96018 575 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 GSTT1P30711 240 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 PRPHP41219 470 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 KRT76Q01546 638 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 PPP2R5AQ15172 486 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 MEI1Q5TIA1 1274 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 SRLQ86TD4 932 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 FBXO18Q8NFZ0 1043 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 DRC1Q96MC2 740 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 OXCT2Q9BYC2 517 aaPredicted RBP8.47□□□□□ -1.05
GPNMB-209ENST00000474157 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms