RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 VPS16Q9H269 839 aa16.12■□□□□ 0.17
NHLRC3-204ENST00000473371 ERVK-24P63145 666 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 KRT31Q15323 416 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 RASSF4Q9H2L5 321 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 SLC5A1P13866 664 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 CASP8Q14790 479 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 EARS2Q5JPH6 523 aaKnown RBP16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 RNF41Q9H4P4 317 aaPredicted RBP16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 ABHD10Q9NUJ1 306 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 PAPPAQ13219 1627 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 MYH8P13535 1937 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 MYO1CO00159 1063 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 GNAT2P19087 354 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 CDC25AP30304 524 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 RRAGBQ5VZM2 374 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 MSL3Q8N5Y2 521 aaKnown RBP16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
NHLRC3-204ENST00000473371 PRDM1O75626 825 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 STARD3NLO95772 234 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 IL2RBP14784 551 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 FECHP22830 423 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 ZNF174Q15697 407 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 RCAN1P53805 252 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 MTA3Q9BTC8 594 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 BLZF1Q9H2G9 400 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 MYO1AQ9UBC5 1043 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 LIMA1Q9UHB6 759 aaKnown RBP16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
NHLRC3-204ENST00000473371 SNAP23O00161 211 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 PDE8AO60658 829 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 BMP15O95972 392 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 FGFR2P21802 821 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 SHISA4Q96DD7 197 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 ACBD3Q9H3P7 528 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 MYH6P13533 1939 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 TRIM66O15016 1216 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 TUBBP07437 444 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 IVLP07476 585 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 MROH5Q6ZUA9 1318 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 PHACTR2O75167 634 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 KRT9P35527 623 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 SPAG1Q07617 926 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 RTL9Q8NET4 1388 aa16.09■□□□□ 0.17
NHLRC3-204ENST00000473371 TNKSO95271 1327 aa16.08■□□□□ 0.17
NHLRC3-204ENST00000473371 PPARAQ07869 468 aa16.08■□□□□ 0.17
NHLRC3-204ENST00000473371 NCAPH2Q6IBW4 605 aa16.08■□□□□ 0.17
NHLRC3-204ENST00000473371 SRLQ86TD4 932 aa16.08■□□□□ 0.17
NHLRC3-204ENST00000473371 FAM71BQ8TC56 605 aa16.08■□□□□ 0.17
NHLRC3-204ENST00000473371 WNT7AO00755 349 aa16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 TRIM14Q14142 442 aa16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 GUCA1BQ9UMX6 200 aa16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
NHLRC3-204ENST00000473371 PKN1Q16512 942 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 ESR2Q92731 530 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 XDHP47989 1333 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 KCNJ18B7U540 433 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 PAK1Q13153 545 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 KCNJ12Q14500 433 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 PPP2R5BQ15173 497 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
NHLRC3-204ENST00000473371 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 PTGDRQ13258 359 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 SEC23AQ15436 765 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 EPN1Q9Y6I3 576 aaPredicted RBP16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 MYH3P11055 1940 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms