RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TRIM34Q9BYJ4 488 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 DNAJC18Q9H819 358 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.86□□□□□ -0.674e-34■■■■■ 131.8
SMC4-214ENST00000472991 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
SMC4-214ENST00000472991 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
SMC4-214ENST00000472991 HERC5Q9UII4 1024 aaKnown RBP10.86□□□□□ -0.67
SMC4-214ENST00000472991 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
SMC4-214ENST00000472991 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 USP17L21D6R901 530 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 NR1I2O75469 434 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 MAP3K10Q02779 954 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 GRM1Q13255 1194 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 VGLL4Q14135 290 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 LDLRAD1Q5T700 205 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 CYP4F22Q6NT55 531 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
SMC4-214ENST00000472991 AMOTL1Q8IY63 956 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 ANKRD13AQ8IZ07 590 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 ZKSCAN4Q969J2 545 aaPredicted RBP10.85□□□□□ -0.67
SMC4-214ENST00000472991 CLMNQ96JQ2 1002 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 NAPBQ9H115 298 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 EHD4Q9H223 541 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 SERPINB13Q9UIV8 391 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 LOC285556D6RIA3 1793 aa10.85□□□□□ -0.67
SMC4-214ENST00000472991 MINDY4BA8MYZ0 360 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 SGSM2O43147 1006 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 CDC45O75419 566 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
SMC4-214ENST00000472991 ZNF157P51786 506 aaPredicted RBP10.84□□□□□ -0.67
SMC4-214ENST00000472991 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 RGMBQ6NW40 437 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 METTL16Q86W50 562 aaKnown RBP10.84□□□□□ -0.67
SMC4-214ENST00000472991 RASAL3Q86YV0 1011 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 FOXP4Q8IVH2 680 aaPredicted RBP10.84□□□□□ -0.67
SMC4-214ENST00000472991 SLC44A5Q8NCS7 719 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 DYNLL2Q96FJ2 89 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 HHIPL1Q96JK4 782 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 ZNF112Q9UJU3 913 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 CSADQ9Y600 493 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 SNCAIPQ9Y6H5 919 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 ZMYM6O95789 1325 aa10.84□□□□□ -0.67
SMC4-214ENST00000472991 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 GDF11O95390 407 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 S1PR4O95977 384 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 ADH1BP00325 375 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 GABPAQ06546 454 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 RRP1BQ14684 758 aaKnown RBP10.83□□□□□ -0.68
SMC4-214ENST00000472991 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
SMC4-214ENST00000472991 SBK1Q52WX2 424 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 SCUBE3Q8IX30 993 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
SMC4-214ENST00000472991 CAPNS2Q96L46 248 aa10.83□□□□□ -0.68
SMC4-214ENST00000472991 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.83□□□□□ -0.68
SMC4-214ENST00000472991 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 FAM155AB1AL88 458 aaPredicted RBP10.82□□□□□ -0.68
SMC4-214ENST00000472991 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
SMC4-214ENST00000472991 LCE2BO14633 110 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 FGAP02671 866 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 SHMT1P34896 483 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 CAP2P40123 477 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 ECE1P42892 770 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 VEGFBP49765 207 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 PPARAQ07869 468 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 ALX1Q15699 326 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 SHROOM1Q2M3G4 852 aaPredicted RBP10.82□□□□□ -0.68
SMC4-214ENST00000472991 NOL9Q5SY16 702 aaKnown RBP10.82□□□□□ -0.68
SMC4-214ENST00000472991 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 SCYL3Q8IZE3 742 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 RDH13Q8NBN7 331 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 SLC10A4Q96EP9 437 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 ESYT1Q9BSJ8 1104 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 DSCC1Q9BVC3 393 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
SMC4-214ENST00000472991 WDR33Q9C0J8 1336 aaKnown RBP10.82□□□□□ -0.68
SMC4-214ENST00000472991 PARP14Q460N5 1801 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
SMC4-214ENST00000472991 AOC2O75106 756 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 GJA5P36382 358 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CDK8P49336 464 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 HAND2P61296 217 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 PTH1RQ03431 593 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CTDSPL2Q05D32 466 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
SMC4-214ENST00000472991 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 C16orf86Q6ZW13 317 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CCDC84Q86UT8 332 aaPredicted RBP10.81□□□□□ -0.68
SMC4-214ENST00000472991 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 CCDC102AQ96A19 550 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms